Analysis of interatomic Contacts of Structural Units in PDB entry:
9FR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FR0 entry

There are 3 chains in PDB entry 9FR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 318	HIS 736
B	THR 317	HIS 736
C	ILE 316	HIS 736

There are 49 helices in PDB entry 9FR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	399	401	Right-handed 310
Helix 2	AA2	A	402	408	Right-handed alpha
Helix 3	AA3	A	409	413	Right-handed 310
Helix 4	AA4	A	443	459	Right-handed alpha
Helix 5	AA5	A	473	479	Right-handed alpha
Helix 6	AA6	A	480	483	Right-handed 310
Helix 7	AA7	A	486	498	Right-handed alpha
Helix 8	AA8	A	510	514	Right-handed 310
Helix 9	AA9	A	535	546	Right-handed alpha
Helix 10	AB1	A	567	578	Right-handed alpha
Helix 11	AB2	A	630	639	Right-handed alpha
Helix 12	AB3	A	674	681	Right-handed alpha
Helix 13	AB4	A	681	692	Right-handed alpha
Helix 14	AB5	A	695	700	Right-handed 310
Helix 15	AB6	A	710	722	Right-handed alpha
Helix 16	AB7	A	723	728	Right-handed alpha
Helix 17	AB8	B	328	334	Right-handed 310
Helix 18	AB9	B	399	401	Right-handed 310
Helix 19	AC1	B	402	413	Right-handed alpha
Helix 20	AC2	B	425	429	Right-handed 310
Helix 21	AC3	B	435	439	Right-handed alpha
Helix 22	AC4	B	443	459	Right-handed alpha
Helix 23	AC5	B	473	498	Right-handed alpha
Helix 24	AC6	B	510	515	Right-handed 310
Helix 25	AC7	B	535	546	Right-handed alpha
Helix 26	AC8	B	568	578	Right-handed alpha
Helix 27	AC9	B	630	639	Right-handed alpha
Helix 28	AD1	B	651	657	Right-handed alpha
Helix 29	AD2	B	665	668	Right-handed 310
Helix 30	AD3	B	674	681	Right-handed alpha
Helix 31	AD4	B	681	692	Right-handed alpha
Helix 32	AD5	B	697	702	Right-handed alpha
Helix 33	AD6	B	710	722	Right-handed alpha
Helix 34	AD7	C	360	364	Right-handed 310
Helix 35	AD8	C	402	411	Right-handed alpha
Helix 36	AD9	C	434	441	Right-handed alpha
Helix 37	AE1	C	444	459	Right-handed alpha
Helix 38	AE2	C	473	498	Right-handed alpha
Helix 39	AE3	C	510	515	Right-handed 310
Helix 40	AE4	C	535	546	Right-handed alpha
Helix 41	AE5	C	568	578	Right-handed alpha
Helix 42	AE6	C	630	639	Right-handed alpha
Helix 43	AE7	C	652	657	Right-handed 310
Helix 44	AE8	C	661	668	Right-handed 310
Helix 45	AE9	C	674	681	Right-handed alpha
Helix 46	AF1	C	681	692	Right-handed alpha
Helix 47	AF2	C	695	702	Right-handed 310
Helix 48	AF3	C	710	722	Right-handed alpha
Helix 49	AF4	C	723	728	Right-handed 310

There are 15 sheets in PDB entry 9FR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	344	first strand
Strand 2	A	431	433	anti-parallel
Strand 3	A	420	422	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	358	first strand
Strand 2	A	389	394	parallel
Strand 3	A	465	470	anti-parallel
Strand 4	A	369	370	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	521	523	first strand
Strand 2	A	505	509	anti-parallel
Strand 3	A	553	555	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	650	first strand
Strand 2	A	603	608	anti-parallel
Strand 3	A	613	618	anti-parallel
Strand 4	A	670	672	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	384	first strand
Strand 2	B	341	345	parallel
Strand 3	B	430	434	anti-parallel
Strand 4	B	421	423	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	354	first strand
Strand 2	B	388	395	parallel
Strand 3	B	357	358	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	354	first strand
Strand 2	B	388	395	parallel
Strand 3	B	463	471	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	559	561	first strand
Strand 2	B	566	567	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	647	650	first strand
Strand 2	B	603	608	anti-parallel
Strand 3	B	613	618	anti-parallel
Strand 4	B	670	672	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	343	345	first strand
Strand 2	C	429	433	anti-parallel
Strand 3	C	421	422	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	389	390	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	369	371	first strand
Strand 2	C	468	470	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	521	523	first strand
Strand 2	C	505	509	anti-parallel
Strand 3	C	553	555	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	559	561	first strand
Strand 2	C	566	567	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	647	650	first strand
Strand 2	C	603	608	anti-parallel
Strand 3	C	613	618	anti-parallel
Strand 4	C	670	672	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FR0