Analysis of interatomic Contacts of Structural Units in PDB entry:
9FS5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FS5 entry

There are 10 chains in PDB entry 9FS5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 1	SER 225
B	CYS 1	SER 225
C	CYS 1	SER 225
D	CYS 1	SER 225
E	CYS 1	SER 225
F	CYS 1	SER 225
G	CYS 1	SER 225
H	CYS 1	SER 225
I	CYS 1	SER 225
J	CYS 1	SER 225

There are 80 helices in PDB entry 9FS5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	10	Right-handed alpha
Helix 2	AA2	A	47	59	Right-handed alpha
Helix 3	AA3	A	66	70	Right-handed 310
Helix 4	AA4	A	87	90	Right-handed 310
Helix 5	AA5	A	96	106	Right-handed alpha
Helix 6	AA6	A	107	112	Right-handed alpha
Helix 7	AA7	A	119	138	Right-handed alpha
Helix 8	AA8	A	203	224	Right-handed alpha
Helix 9	AA9	B	2	10	Right-handed alpha
Helix 10	AB1	B	47	59	Right-handed alpha
Helix 11	AB2	B	66	70	Right-handed 310
Helix 12	AB3	B	87	90	Right-handed 310
Helix 13	AB4	B	96	106	Right-handed alpha
Helix 14	AB5	B	107	112	Right-handed alpha
Helix 15	AB6	B	119	138	Right-handed alpha
Helix 16	AB7	B	203	224	Right-handed alpha
Helix 17	AB8	C	2	10	Right-handed alpha
Helix 18	AB9	C	47	59	Right-handed alpha
Helix 19	AC1	C	66	70	Right-handed 310
Helix 20	AC2	C	87	90	Right-handed 310
Helix 21	AC3	C	96	106	Right-handed alpha
Helix 22	AC4	C	107	112	Right-handed alpha
Helix 23	AC5	C	119	138	Right-handed alpha
Helix 24	AC6	C	203	224	Right-handed alpha
Helix 25	AC7	D	2	10	Right-handed alpha
Helix 26	AC8	D	47	59	Right-handed alpha
Helix 27	AC9	D	66	70	Right-handed 310
Helix 28	AD1	D	87	90	Right-handed 310
Helix 29	AD2	D	96	106	Right-handed alpha
Helix 30	AD3	D	107	112	Right-handed alpha
Helix 31	AD4	D	119	138	Right-handed alpha
Helix 32	AD5	D	203	224	Right-handed alpha
Helix 33	AD6	E	2	10	Right-handed alpha
Helix 34	AD7	E	47	59	Right-handed alpha
Helix 35	AD8	E	66	70	Right-handed 310
Helix 36	AD9	E	87	90	Right-handed 310
Helix 37	AE1	E	96	106	Right-handed alpha
Helix 38	AE2	E	107	112	Right-handed alpha
Helix 39	AE3	E	119	138	Right-handed alpha
Helix 40	AE4	E	203	224	Right-handed alpha
Helix 41	AE5	F	2	10	Right-handed alpha
Helix 42	AE6	F	47	59	Right-handed alpha
Helix 43	AE7	F	66	70	Right-handed 310
Helix 44	AE8	F	87	90	Right-handed 310
Helix 45	AE9	F	96	106	Right-handed alpha
Helix 46	AF1	F	107	112	Right-handed alpha
Helix 47	AF2	F	119	138	Right-handed alpha
Helix 48	AF3	F	203	224	Right-handed alpha
Helix 49	AF4	G	2	10	Right-handed alpha
Helix 50	AF5	G	47	59	Right-handed alpha
Helix 51	AF6	G	66	70	Right-handed 310
Helix 52	AF7	G	87	90	Right-handed 310
Helix 53	AF8	G	96	106	Right-handed alpha
Helix 54	AF9	G	107	112	Right-handed alpha
Helix 55	AG1	G	119	138	Right-handed alpha
Helix 56	AG2	G	203	224	Right-handed alpha
Helix 57	AG3	H	2	10	Right-handed alpha
Helix 58	AG4	H	47	59	Right-handed alpha
Helix 59	AG5	H	66	70	Right-handed 310
Helix 60	AG6	H	87	90	Right-handed 310
Helix 61	AG7	H	96	106	Right-handed alpha
Helix 62	AG8	H	107	112	Right-handed alpha
Helix 63	AG9	H	119	138	Right-handed alpha
Helix 64	AH1	H	203	224	Right-handed alpha
Helix 65	AH2	I	2	10	Right-handed alpha
Helix 66	AH3	I	47	59	Right-handed alpha
Helix 67	AH4	I	66	70	Right-handed 310
Helix 68	AH5	I	87	90	Right-handed 310
Helix 69	AH6	I	96	106	Right-handed alpha
Helix 70	AH7	I	107	112	Right-handed alpha
Helix 71	AH8	I	119	138	Right-handed alpha
Helix 72	AH9	I	203	224	Right-handed alpha
Helix 73	AI1	J	2	10	Right-handed alpha
Helix 74	AI2	J	47	59	Right-handed alpha
Helix 75	AI3	J	66	70	Right-handed 310
Helix 76	AI4	J	87	90	Right-handed 310
Helix 77	AI5	J	96	106	Right-handed alpha
Helix 78	AI6	J	107	112	Right-handed alpha
Helix 79	AI7	J	119	138	Right-handed alpha
Helix 80	AI8	J	203	224	Right-handed alpha

There are 11 sheets in PDB entry 9FS5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	19	first strand
Strand 2	A	187	200	anti-parallel
Strand 3	A	141	154	anti-parallel
Strand 4	A	72	85	anti-parallel
Strand 5	A	32	39	parallel
Strand 6	A	62	63	parallel

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There are 21 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	170	first strand
Strand 2	A	174	184	anti-parallel
Strand 3	J	160	170	anti-parallel
Strand 4	J	174	184	anti-parallel
Strand 5	I	160	170	anti-parallel
Strand 6	I	174	184	anti-parallel
Strand 7	H	160	170	anti-parallel
Strand 8	H	174	184	anti-parallel
Strand 9	G	160	170	anti-parallel
Strand 10	G	174	184	anti-parallel
Strand 11	F	160	170	anti-parallel
Strand 12	F	174	184	anti-parallel
Strand 13	E	160	170	anti-parallel
Strand 14	E	174	184	anti-parallel
Strand 15	D	160	170	anti-parallel
Strand 16	D	174	184	anti-parallel
Strand 17	C	160	170	anti-parallel
Strand 18	C	174	184	anti-parallel
Strand 19	B	160	170	anti-parallel
Strand 20	B	174	184	anti-parallel
Strand 21	A	160	170	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	19	first strand
Strand 2	B	187	200	anti-parallel
Strand 3	B	141	154	anti-parallel
Strand 4	B	72	85	anti-parallel
Strand 5	B	32	39	parallel
Strand 6	B	62	63	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	19	first strand
Strand 2	C	187	200	anti-parallel
Strand 3	C	141	154	anti-parallel
Strand 4	C	72	85	anti-parallel
Strand 5	C	32	39	parallel
Strand 6	C	62	63	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	19	first strand
Strand 2	D	187	200	anti-parallel
Strand 3	D	141	154	anti-parallel
Strand 4	D	72	85	anti-parallel
Strand 5	D	32	39	parallel
Strand 6	D	62	63	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	14	19	first strand
Strand 2	E	187	200	anti-parallel
Strand 3	E	141	154	anti-parallel
Strand 4	E	72	85	anti-parallel
Strand 5	E	32	39	parallel
Strand 6	E	62	63	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	19	first strand
Strand 2	F	187	200	anti-parallel
Strand 3	F	141	154	anti-parallel
Strand 4	F	72	85	anti-parallel
Strand 5	F	32	39	parallel
Strand 6	F	62	63	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	14	19	first strand
Strand 2	G	187	200	anti-parallel
Strand 3	G	141	154	anti-parallel
Strand 4	G	72	85	anti-parallel
Strand 5	G	32	39	parallel
Strand 6	G	62	63	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	14	19	first strand
Strand 2	H	187	200	anti-parallel
Strand 3	H	141	154	anti-parallel
Strand 4	H	72	85	anti-parallel
Strand 5	H	32	39	parallel
Strand 6	H	62	63	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	14	19	first strand
Strand 2	I	187	200	anti-parallel
Strand 3	I	141	154	anti-parallel
Strand 4	I	72	85	anti-parallel
Strand 5	I	32	39	parallel
Strand 6	I	62	63	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	14	19	first strand
Strand 2	J	187	200	anti-parallel
Strand 3	J	141	154	anti-parallel
Strand 4	J	72	85	anti-parallel
Strand 5	J	32	39	parallel
Strand 6	J	62	63	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FS5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FS5