Analysis of interatomic Contacts of Structural Units in PDB entry:
9FSH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FSH entry

There is 1 chain in PDB entry 9FSH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 369GLU 741
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9FSH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
369 387Right-handed alpha
Helix 2
AA2
A
401 412Right-handed alpha
Helix 3
AA3
A
413 420Right-handed 310
Helix 4
AA4
A
433 449Right-handed alpha
Helix 5
AA5
A
450 455Right-handed 310
Helix 6
AA6
A
472 476Right-handed 310
Helix 7
AA7
A
478 496Right-handed alpha
Helix 8
AA8
A
505 513Right-handed alpha
Helix 9
AA9
A
518 520Right-handed 310
Helix 10
AB1
A
521 526Right-handed alpha
Helix 11
AB2
A
526 539Right-handed alpha
Helix 12
AB3
A
567 571Right-handed 310
Helix 13
AB4
A
577 591Right-handed alpha
Helix 14
AB5
A
594 607Right-handed alpha
Helix 15
AB6
A
610 615Right-handed 310
Helix 16
AB7
A
618 628Right-handed alpha
Helix 17
AB8
A
633 640Right-handed alpha
Helix 18
AB9
A
650 663Right-handed alpha
Helix 19
AC1
A
664 677Right-handed alpha
Helix 20
AC2
A
685 689Right-handed 310
Helix 21
AC3
A
727 740Right-handed alpha
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There are 4 sheets in PDB entry 9FSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
392 397first strand
Strand 2
A
421 426parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
457 459first strand
Strand 2
A
467 469anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
550 555first strand
Strand 2
A
558 563anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
641 644first strand
Strand 2
A
698 702parallel
Strand 3
A
719 722parallel
Strand 4
A
712 714anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il