Analysis of interatomic Contacts of Structural Units in PDB entry:
9FSK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FSK entry

There are 4 chains in PDB entry 9FSK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 377	GLU 750
B	ASP 377	GLU 750
C	ASP 377	GLU 750
D	ASP 377	ASN 482

There are 85 helices in PDB entry 9FSK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	377	392	Right-handed alpha
Helix 2	AA2	A	407	419	Right-handed alpha
Helix 3	AA3	A	420	425	Right-handed alpha
Helix 4	AA4	A	443	456	Right-handed alpha
Helix 5	AA5	A	457	461	Right-handed 310
Helix 6	AA6	A	478	482	Right-handed 310
Helix 7	AA7	A	484	502	Right-handed alpha
Helix 8	AA8	A	511	519	Right-handed alpha
Helix 9	AA9	A	524	526	Right-handed 310
Helix 10	AB1	A	527	532	Right-handed alpha
Helix 11	AB2	A	532	545	Right-handed alpha
Helix 12	AB3	A	573	577	Right-handed 310
Helix 13	AB4	A	583	597	Right-handed alpha
Helix 14	AB5	A	600	613	Right-handed alpha
Helix 15	AB6	A	616	621	Right-handed 310
Helix 16	AB7	A	624	634	Right-handed alpha
Helix 17	AB8	A	639	646	Right-handed alpha
Helix 18	AB9	A	656	669	Right-handed alpha
Helix 19	AC1	A	670	683	Right-handed alpha
Helix 20	AC2	A	691	695	Right-handed 310
Helix 21	AC3	A	724	726	Right-handed 310
Helix 22	AC4	A	736	750	Right-handed alpha
Helix 23	AC5	B	378	393	Right-handed alpha
Helix 24	AC6	B	407	419	Right-handed alpha
Helix 25	AC7	B	420	425	Right-handed alpha
Helix 26	AC8	B	443	456	Right-handed alpha
Helix 27	AC9	B	457	461	Right-handed 310
Helix 28	AD1	B	477	483	Right-handed 310
Helix 29	AD2	B	484	502	Right-handed alpha
Helix 30	AD3	B	511	519	Right-handed alpha
Helix 31	AD4	B	524	526	Right-handed 310
Helix 32	AD5	B	527	532	Right-handed alpha
Helix 33	AD6	B	532	545	Right-handed alpha
Helix 34	AD7	B	573	577	Right-handed 310
Helix 35	AD8	B	583	597	Right-handed alpha
Helix 36	AD9	B	600	613	Right-handed alpha
Helix 37	AE1	B	616	621	Right-handed 310
Helix 38	AE2	B	624	634	Right-handed alpha
Helix 39	AE3	B	639	646	Right-handed alpha
Helix 40	AE4	B	656	669	Right-handed alpha
Helix 41	AE5	B	670	683	Right-handed alpha
Helix 42	AE6	B	690	695	Right-handed 310
Helix 43	AE7	B	724	726	Right-handed 310
Helix 44	AE8	B	736	749	Right-handed alpha
Helix 45	AE9	C	378	392	Right-handed alpha
Helix 46	AF1	C	407	419	Right-handed alpha
Helix 47	AF2	C	420	425	Right-handed alpha
Helix 48	AF3	C	443	456	Right-handed alpha
Helix 49	AF4	C	457	461	Right-handed 310
Helix 50	AF5	C	478	483	Right-handed 310
Helix 51	AF6	C	484	502	Right-handed alpha
Helix 52	AF7	C	511	520	Right-handed alpha
Helix 53	AF8	C	527	532	Right-handed alpha
Helix 54	AF9	C	532	545	Right-handed alpha
Helix 55	AG1	C	583	598	Right-handed alpha
Helix 56	AG2	C	600	613	Right-handed alpha
Helix 57	AG3	C	616	621	Right-handed alpha
Helix 58	AG4	C	624	634	Right-handed alpha
Helix 59	AG5	C	639	646	Right-handed alpha
Helix 60	AG6	C	656	668	Right-handed alpha
Helix 61	AG7	C	670	683	Right-handed alpha
Helix 62	AG8	C	691	695	Right-handed 310
Helix 63	AG9	C	724	726	Right-handed 310
Helix 64	AH1	C	736	750	Right-handed alpha
Helix 65	AH2	D	378	393	Right-handed alpha
Helix 66	AH3	D	407	419	Right-handed alpha
Helix 67	AH4	D	420	425	Right-handed alpha
Helix 68	AH5	D	443	456	Right-handed alpha
Helix 69	AH6	D	457	461	Right-handed 310
Helix 70	AH7	D	478	483	Right-handed 310
Helix 71	AH8	D	484	502	Right-handed alpha
Helix 72	AH9	D	511	519	Right-handed alpha
Helix 73	AI1	D	524	526	Right-handed 310
Helix 74	AI2	D	527	532	Right-handed alpha
Helix 75	AI3	D	532	545	Right-handed alpha
Helix 76	AI4	D	573	577	Right-handed 310
Helix 77	AI5	D	583	598	Right-handed alpha
Helix 78	AI6	D	600	613	Right-handed alpha
Helix 79	AI7	D	616	621	Right-handed alpha
Helix 80	AI8	D	624	634	Right-handed alpha
Helix 81	AI9	D	639	646	Right-handed alpha
Helix 82	AJ1	D	658	669	Right-handed alpha
Helix 83	AJ2	D	670	683	Right-handed alpha
Helix 84	AJ3	D	724	726	Right-handed 310
Helix 85	AJ4	D	736	749	Right-handed alpha

There are 17 sheets in PDB entry 9FSK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	403	first strand
Strand 2	A	427	432	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	465	first strand
Strand 2	A	473	475	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	561	first strand
Strand 2	A	564	569	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	647	650	first strand
Strand 2	A	707	711	parallel
Strand 3	A	728	731	parallel
Strand 4	A	721	723	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	403	first strand
Strand 2	B	427	432	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	465	first strand
Strand 2	B	473	475	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	557	first strand
Strand 2	B	568	569	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	560	561	first strand
Strand 2	B	564	565	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	647	650	first strand
Strand 2	B	707	711	parallel
Strand 3	B	728	731	parallel
Strand 4	B	721	723	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	403	first strand
Strand 2	C	427	432	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	463	465	first strand
Strand 2	C	473	475	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	556	559	first strand
Strand 2	C	566	569	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	647	650	first strand
Strand 2	C	707	711	parallel
Strand 3	C	728	731	parallel
Strand 4	C	721	723	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	403	first strand
Strand 2	D	427	432	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	463	465	first strand
Strand 2	D	473	475	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	556	557	first strand
Strand 2	D	568	569	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	647	650	first strand
Strand 2	D	707	711	parallel
Strand 3	D	728	731	parallel
Strand 4	D	721	723	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FSK

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FSK