Analysis of interatomic Contacts of Structural Units in PDB entry:
9FTB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FTB entry

There is 1 chain in PDB entry 9FTB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13THR 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 9FTB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 60Right-handed alpha
Helix 2
AA2
A
71 81Right-handed alpha
Helix 3
AA3
A
93 97Right-handed 310
Helix 4
AA4
A
99 116Right-handed alpha
Helix 5
AA5
A
133 147Right-handed alpha
Helix 6
AA6
A
162 165Right-handed 310
Helix 7
AA7
A
179 183Right-handed 310
Helix 8
AA8
A
186 190Right-handed 310
Helix 9
AA9
A
205 210Right-handed alpha
Helix 10
AB1
A
225 229Right-handed 310
Helix 11
AB2
A
234 246Right-handed alpha
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There are 3 sheets in PDB entry 9FTB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
22 28parallel
Strand 3
A
121 125parallel
Strand 4
A
194 204anti-parallel
Strand 5
A
152 158anti-parallel
Strand 6
A
219 223parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 43first strand
Strand 2
A
46 47anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
175 177anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il