Analysis of interatomic Contacts of Structural Units in PDB entry:
9FTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FTF entry

There is 1 chain in PDB entry 9FTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1481GLN 1743
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 17 helices in PDB entry 9FTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1482 1486Right-handed 310
Helix 2
AA2
A
1487 1513Right-handed alpha
Helix 3
AA3
A
1516 1520Right-handed 310
Helix 4
AA4
A
1526 1537Right-handed alpha
Helix 5
AA5
A
1538 1554Right-handed alpha
Helix 6
AA6
A
1554 1560Right-handed alpha
Helix 7
AA7
A
1565 1579Right-handed alpha
Helix 8
AA8
A
1585 1593Right-handed alpha
Helix 9
AA9
A
1594 1604Right-handed alpha
Helix 10
AB1
A
1614 1618Right-handed 310
Helix 11
AB2
A
1619 1641Right-handed alpha
Helix 12
AB3
A
1653 1655Right-handed 310
Helix 13
AB4
A
1656 1677Right-handed alpha
Helix 14
AB5
A
1678 1681Right-handed 310
Helix 15
AB6
A
1689 1708Right-handed alpha
Helix 16
AB7
A
1710 1714Right-handed 310
Helix 17
AB8
A
1727 1743Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 9FTF.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1647 1650first strand
Strand 2
A
1721 1724parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il