Analysis of interatomic Contacts of Structural Units in PDB entry:
9FTM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FTM entry

There are 8 chains in PDB entry 9FTM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 VAL 128LEU 164
G
 ALA 17GLY 110
A
 ALA 17SER 146
H
 ALA 17GLU 103
I
 ALA 17SER 94
K
 ASP 133ASP 172
F
 ASP 14MET 137
B
 ARG 132ALA 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 9FTM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
128 143Right-handed alpha
Helix 2
AA2
D
144 148Right-handed 310
Helix 3
AA3
D
157 164Right-handed alpha
Helix 4
AA4
G
18 50Right-handed alpha
Helix 5
AA5
G
56 110Right-handed alpha
Helix 6
AA6
A
18 44Right-handed alpha
Helix 7
AA7
A
69 107Right-handed alpha
Helix 8
AA8
A
125 144Right-handed alpha
Helix 9
AA9
H
18 51Right-handed alpha
Helix 10
AB1
H
59 103Right-handed alpha
Helix 11
AB2
I
18 48Right-handed alpha
Helix 12
AB3
I
64 94Right-handed alpha
Helix 13
AB4
K
134 143Right-handed alpha
Helix 14
AB5
K
156 172Right-handed alpha
Helix 15
AB6
F
15 49Right-handed alpha
Helix 16
AB7
F
59 110Right-handed alpha
Helix 17
AB8
F
129 137Right-handed alpha
Helix 18
AB9
B
133 143Right-handed alpha
Helix 19
AC1
B
144 148Right-handed 310
Helix 20
AC2
B
156 165Right-handed alpha
Back to top of page
There are no sheets in PDB entry 9FTM
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il