Analysis of interatomic Contacts of Structural Units in PDB entry:
9FTW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FTW entry

There are 2 chains in PDB entry 9FTW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 134SER 408
B
 HIS 131SER 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9FTW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
137 152Right-handed alpha
Helix 2
AA2
A
157 159Right-handed 310
Helix 3
AA3
A
170 177Right-handed 310
Helix 4
AA4
A
191 195Right-handed 310
Helix 5
AA5
A
196 206Right-handed alpha
Helix 6
AA6
A
220 236Right-handed alpha
Helix 7
AA7
A
237 250Right-handed alpha
Helix 8
AA8
A
255 269Right-handed alpha
Helix 9
AA9
A
281 288Right-handed alpha
Helix 10
AB1
A
301 311Right-handed alpha
Helix 11
AB2
A
353 368Right-handed alpha
Helix 12
AB3
B
137 152Right-handed alpha
Helix 13
AB4
B
157 159Right-handed 310
Helix 14
AB5
B
170 174Right-handed 310
Helix 15
AB6
B
191 195Right-handed 310
Helix 16
AB7
B
196 206Right-handed alpha
Helix 17
AB8
B
220 236Right-handed alpha
Helix 18
AB9
B
237 250Right-handed alpha
Helix 19
AC1
B
255 269Right-handed alpha
Helix 20
AC2
B
281 288Right-handed alpha
Helix 21
AC3
B
301 311Right-handed alpha
Helix 22
AC4
B
353 368Right-handed alpha
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There are 8 sheets in PDB entry 9FTW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
186 189anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 292first strand
Strand 2
A
295 297anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 322first strand
Strand 2
A
330 338anti-parallel
Strand 3
A
341 350anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 377first strand
Strand 2
A
380 388anti-parallel
Strand 3
A
401 406anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
B
186 189anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 292first strand
Strand 2
B
295 297anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 322first strand
Strand 2
B
330 338anti-parallel
Strand 3
B
341 350anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 377first strand
Strand 2
B
380 388anti-parallel
Strand 3
B
401 407anti-parallel
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