Analysis of interatomic Contacts of Structural Units in PDB entry:
9FU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FU5 entry

There is 1 chain in PDB entry 9FU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11PHE 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9FU5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 33Right-handed alpha
Helix 2
AA2
A
91 106Right-handed alpha
Helix 3
AA3
A
143 147Right-handed 310
Helix 4
AA4
A
154 174Right-handed alpha
Helix 5
AA5
A
178 183Right-handed alpha
Helix 6
AA6
A
184 186Right-handed 310
Helix 7
AA7
A
193 210Right-handed alpha
Helix 8
AA8
A
215 228Right-handed alpha
Helix 9
AA9
A
246 248Right-handed 310
Helix 10
AB1
A
271 293Right-handed alpha
Helix 11
AB2
A
304 317Right-handed alpha
Helix 12
AB3
A
322 348Right-handed alpha
Helix 13
AB4
A
356 360Right-handed 310
Helix 14
AB5
A
363 372Right-handed alpha
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There are 3 sheets in PDB entry 9FU5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 44first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
67 76anti-parallel
Strand 4
A
127 131anti-parallel
Strand 5
A
113 117anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
250 253anti-parallel
Strand 3
A
256 260anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 241first strand
Strand 2
A
267 269anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il