Analysis of interatomic Contacts of Structural Units in PDB entry:
9FUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FUH entry

There is 1 chain in PDB entry 9FUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 5GLN 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9FUH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
103 111Right-handed 310
Helix 2
AA2
A
139 146Right-handed alpha
Helix 3
AA3
A
189 195Right-handed alpha
Helix 4
AA4
A
211 215Right-handed 310
Helix 5
AA5
A
290 297Right-handed alpha
Helix 6
AA6
A
320 325Right-handed alpha
Helix 7
AA7
A
326 328Right-handed 310
Helix 8
AA8
A
332 345Right-handed alpha
Helix 9
AA9
A
348 361Right-handed alpha
Helix 10
AB1
A
364 369Right-handed alpha
Helix 11
AB2
A
385 391Right-handed alpha
Helix 12
AB3
A
391 402Right-handed alpha
Helix 13
AB4
A
425 438Right-handed alpha
Helix 14
AB5
A
448 458Right-handed alpha
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There are 6 sheets in PDB entry 9FUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 18first strand
Strand 2
A
38 53parallel
Strand 3
A
79 86parallel
Strand 4
A
118 124anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 18first strand
Strand 2
A
38 53parallel
Strand 3
A
56 63anti-parallel
Strand 4
A
184 185parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
72 75first strand
Strand 2
A
149 155parallel
Strand 3
A
129 134anti-parallel
Strand 4
A
97 98anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
200 203first strand
Strand 2
A
165 174anti-parallel
Strand 3
A
223 232parallel
Strand 4
A
271 277anti-parallel
Strand 5
A
246 251anti-parallel
Strand 6
A
258 261anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
216 219first strand
Strand 2
A
300 306parallel
Strand 3
A
282 288anti-parallel
Strand 4
A
237 242anti-parallel
Strand 5
A
263 266anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
403 409first strand
Strand 2
A
412 418anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il