Analysis of interatomic Contacts of Structural Units in PDB entry:
9FUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FUQ entry

There are 2 chains in PDB entry 9FUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12PHE 580
B
 THR 12PHE 580
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 9FUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed alpha
Helix 2
AA2
A
22 24Right-handed 310
Helix 3
AA3
A
31 36Right-handed alpha
Helix 4
AA4
A
41 46Right-handed alpha
Helix 5
AA5
A
47 53Right-handed alpha
Helix 6
AA6
A
67 84Right-handed alpha
Helix 7
AA7
A
100 105Right-handed alpha
Helix 8
AA8
A
106 111Right-handed 310
Helix 9
AA9
A
112 117Right-handed alpha
Helix 10
AB1
A
120 126Right-handed alpha
Helix 11
AB2
A
133 138Right-handed alpha
Helix 12
AB3
A
159 164Right-handed alpha
Helix 13
AB4
A
164 169Right-handed alpha
Helix 14
AB5
A
170 172Right-handed 310
Helix 15
AB6
A
173 182Right-handed alpha
Helix 16
AB7
A
182 189Right-handed alpha
Helix 17
AB8
A
191 212Right-handed alpha
Helix 18
AB9
A
213 220Right-handed alpha
Helix 19
AC1
A
226 234Right-handed alpha
Helix 20
AC2
A
235 240Right-handed alpha
Helix 21
AC3
A
252 263Right-handed alpha
Helix 22
AC4
A
265 270Right-handed alpha
Helix 23
AC5
A
288 294Right-handed alpha
Helix 24
AC6
A
307 312Right-handed alpha
Helix 25
AC7
A
320 324Right-handed 310
Helix 26
AC8
A
381 386Right-handed 310
Helix 27
AC9
A
406 410Right-handed 310
Helix 28
AD1
A
411 417Right-handed alpha
Helix 29
AD2
A
432 437Right-handed alpha
Helix 30
AD3
A
446 457Right-handed alpha
Helix 31
AD4
A
459 466Right-handed alpha
Helix 32
AD5
A
482 498Right-handed alpha
Helix 33
AD6
A
514 527Right-handed alpha
Helix 34
AD7
A
539 544Right-handed alpha
Helix 35
AD8
A
561 568Right-handed alpha
Helix 36
AD9
A
571 580Right-handed alpha
Helix 37
AE1
B
16 21Right-handed alpha
Helix 38
AE2
B
22 24Right-handed 310
Helix 39
AE3
B
31 39Right-handed alpha
Helix 40
AE4
B
41 46Right-handed alpha
Helix 41
AE5
B
47 54Right-handed alpha
Helix 42
AE6
B
67 88Right-handed alpha
Helix 43
AE7
B
103 107Right-handed 310
Helix 44
AE8
B
112 118Right-handed alpha
Helix 45
AE9
B
122 124Right-handed 310
Helix 46
AF1
B
125 130Right-handed alpha
Helix 47
AF2
B
151 164Right-handed alpha
Helix 48
AF3
B
175 191Right-handed alpha
Helix 49
AF4
B
196 212Right-handed alpha
Helix 50
AF5
B
213 220Right-handed alpha
Helix 51
AF6
B
224 247Right-handed alpha
Helix 52
AF7
B
250 272Right-handed alpha
Helix 53
AF8
B
282 291Right-handed alpha
Helix 54
AF9
B
295 300Right-handed alpha
Helix 55
AG1
B
313 322Right-handed alpha
Helix 56
AG2
B
383 388Right-handed alpha
Helix 57
AG3
B
411 417Right-handed alpha
Helix 58
AG4
B
432 438Right-handed alpha
Helix 59
AG5
B
446 457Right-handed alpha
Helix 60
AG6
B
459 466Right-handed alpha
Helix 61
AG7
B
482 498Right-handed alpha
Helix 62
AG8
B
515 527Right-handed alpha
Helix 63
AG9
B
538 544Right-handed alpha
Helix 64
AH1
B
563 568Right-handed alpha
Helix 65
AH2
B
571 580Right-handed alpha
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There are 7 sheets in PDB entry 9FUQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 366first strand
Strand 2
A
342 349anti-parallel
Strand 3
A
397 402anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 534first strand
Strand 2
A
371 374parallel
Strand 3
A
547 552parallel
Strand 4
A
555 560anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
501 502parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
365 366anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
397 402anti-parallel
Strand 4
B
405 406anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 534first strand
Strand 2
B
371 375parallel
Strand 3
B
547 552parallel
Strand 4
B
555 560anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
421 422first strand
Strand 2
B
503 504parallel
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