Analysis of interatomic Contacts of Structural Units in PDB entry:
9FUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FUV entry

There are 2 chains in PDB entry 9FUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12PHE 580
B
 THR 12PHE 580
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 9FUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 47Right-handed alpha
Helix 2
AA2
A
47 55Right-handed alpha
Helix 3
AA3
A
62 111Right-handed alpha
Helix 4
AA4
A
120 129Right-handed alpha
Helix 5
AA5
A
129 164Right-handed alpha
Helix 6
AA6
A
166 213Right-handed alpha
Helix 7
AA7
A
213 221Right-handed alpha
Helix 8
AA8
A
222 269Right-handed alpha
Helix 9
AA9
A
281 323Right-handed alpha
Helix 10
AB1
A
381 390Right-handed alpha
Helix 11
AB2
A
411 418Right-handed alpha
Helix 12
AB3
A
432 438Right-handed alpha
Helix 13
AB4
A
446 457Right-handed alpha
Helix 14
AB5
A
459 466Right-handed alpha
Helix 15
AB6
A
468 472Right-handed 310
Helix 16
AB7
A
482 498Right-handed alpha
Helix 17
AB8
A
515 528Right-handed alpha
Helix 18
AB9
A
538 545Right-handed alpha
Helix 19
AC1
A
561 568Right-handed alpha
Helix 20
AC2
A
571 580Right-handed alpha
Helix 21
AC3
B
16 21Right-handed alpha
Helix 22
AC4
B
23 55Right-handed alpha
Helix 23
AC5
B
61 110Right-handed alpha
Helix 24
AC6
B
122 129Right-handed alpha
Helix 25
AC7
B
129 147Right-handed alpha
Helix 26
AC8
B
147 164Right-handed alpha
Helix 27
AC9
B
166 173Right-handed alpha
Helix 28
AD1
B
173 213Right-handed alpha
Helix 29
AD2
B
213 220Right-handed alpha
Helix 30
AD3
B
222 272Right-handed alpha
Helix 31
AD4
B
281 323Right-handed alpha
Helix 32
AD5
B
381 391Right-handed alpha
Helix 33
AD6
B
411 418Right-handed alpha
Helix 34
AD7
B
432 438Right-handed alpha
Helix 35
AD8
B
446 457Right-handed alpha
Helix 36
AD9
B
459 466Right-handed alpha
Helix 37
AE1
B
468 472Right-handed 310
Helix 38
AE2
B
482 498Right-handed alpha
Helix 39
AE3
B
515 528Right-handed alpha
Helix 40
AE4
B
538 545Right-handed alpha
Helix 41
AE5
B
561 568Right-handed alpha
Helix 42
AE6
B
571 580Right-handed alpha
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There are 4 sheets in PDB entry 9FUV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
397 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 422first strand
Strand 2
A
501 504parallel
Strand 3
A
531 534parallel
Strand 4
A
371 373parallel
Strand 5
A
547 551parallel
Strand 6
A
556 560anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
342 345first strand
Strand 2
B
399 402anti-parallel
Strand 3
B
405 406anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 504parallel
Strand 3
B
531 535parallel
Strand 4
B
371 374parallel
Strand 5
B
547 548parallel
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