Analysis of interatomic Contacts of Structural Units in PDB entry:
9FV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FV3 entry

There are 2 chains in PDB entry 9FV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12GLN 574
B
 THR 12GLN 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 9FV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 21Right-handed alpha
Helix 2
AA2
A
23 47Right-handed alpha
Helix 3
AA3
A
47 55Right-handed alpha
Helix 4
AA4
A
66 94Right-handed alpha
Helix 5
AA5
A
97 107Right-handed alpha
Helix 6
AA6
A
112 118Right-handed alpha
Helix 7
AA7
A
123 137Right-handed alpha
Helix 8
AA8
A
140 164Right-handed alpha
Helix 9
AA9
A
164 213Right-handed alpha
Helix 10
AB1
A
213 218Right-handed alpha
Helix 11
AB2
A
223 250Right-handed alpha
Helix 12
AB3
A
250 270Right-handed alpha
Helix 13
AB4
A
280 294Right-handed alpha
Helix 14
AB5
A
294 304Right-handed alpha
Helix 15
AB6
A
304 323Right-handed alpha
Helix 16
AB7
A
382 390Right-handed alpha
Helix 17
AB8
A
408 410Right-handed 310
Helix 18
AB9
A
411 418Right-handed alpha
Helix 19
AC1
A
432 438Right-handed alpha
Helix 20
AC2
A
446 457Right-handed alpha
Helix 21
AC3
A
482 495Right-handed alpha
Helix 22
AC4
A
514 529Right-handed alpha
Helix 23
AC5
A
539 544Right-handed alpha
Helix 24
AC6
A
561 565Right-handed 310
Helix 25
AC7
B
13 21Right-handed alpha
Helix 26
AC8
B
23 47Right-handed alpha
Helix 27
AC9
B
47 54Right-handed alpha
Helix 28
AD1
B
61 90Right-handed alpha
Helix 29
AD2
B
96 107Right-handed alpha
Helix 30
AD3
B
112 117Right-handed alpha
Helix 31
AD4
B
123 139Right-handed alpha
Helix 32
AD5
B
143 213Right-handed alpha
Helix 33
AD6
B
213 220Right-handed alpha
Helix 34
AD7
B
223 249Right-handed alpha
Helix 35
AD8
B
250 269Right-handed alpha
Helix 36
AD9
B
280 294Right-handed alpha
Helix 37
AE1
B
294 304Right-handed alpha
Helix 38
AE2
B
304 324Right-handed alpha
Helix 39
AE3
B
382 388Right-handed alpha
Helix 40
AE4
B
408 410Right-handed 310
Helix 41
AE5
B
411 417Right-handed alpha
Helix 42
AE6
B
432 437Right-handed alpha
Helix 43
AE7
B
446 458Right-handed alpha
Helix 44
AE8
B
459 464Right-handed alpha
Helix 45
AE9
B
482 496Right-handed alpha
Helix 46
AF1
B
514 527Right-handed alpha
Helix 47
AF2
B
538 544Right-handed alpha
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There are 4 sheets in PDB entry 9FV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
397 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 422first strand
Strand 2
A
501 504parallel
Strand 3
A
532 535parallel
Strand 4
A
371 374parallel
Strand 5
A
547 548parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
342 348anti-parallel
Strand 3
B
397 402anti-parallel
Strand 4
B
405 406anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 504parallel
Strand 3
B
532 536parallel
Strand 4
B
371 375parallel
Strand 5
B
547 548parallel
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