Analysis of interatomic Contacts of Structural Units in PDB entry:
9FV4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FV4 entry

There are 2 chains in PDB entry 9FV4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12GLN 574
B
 THR 12GLN 574
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 9FV4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed alpha
Helix 2
AA2
A
23 47Right-handed alpha
Helix 3
AA3
A
47 53Right-handed alpha
Helix 4
AA4
A
62 109Right-handed alpha
Helix 5
AA5
A
122 129Right-handed alpha
Helix 6
AA6
A
140 164Right-handed alpha
Helix 7
AA7
A
168 201Right-handed alpha
Helix 8
AA8
A
201 213Right-handed alpha
Helix 9
AA9
A
222 250Right-handed alpha
Helix 10
AB1
A
250 270Right-handed alpha
Helix 11
AB2
A
280 293Right-handed alpha
Helix 12
AB3
A
294 324Right-handed alpha
Helix 13
AB4
A
381 390Right-handed alpha
Helix 14
AB5
A
411 419Right-handed alpha
Helix 15
AB6
A
432 438Right-handed alpha
Helix 16
AB7
A
446 457Right-handed alpha
Helix 17
AB8
A
459 466Right-handed alpha
Helix 18
AB9
A
482 498Right-handed alpha
Helix 19
AC1
A
515 527Right-handed alpha
Helix 20
AC2
A
538 544Right-handed alpha
Helix 21
AC3
A
561 566Right-handed alpha
Helix 22
AC4
A
567 569Right-handed 310
Helix 23
AC5
B
16 21Right-handed alpha
Helix 24
AC6
B
23 47Right-handed alpha
Helix 25
AC7
B
47 54Right-handed alpha
Helix 26
AC8
B
61 96Right-handed alpha
Helix 27
AC9
B
96 109Right-handed alpha
Helix 28
AD1
B
112 119Right-handed alpha
Helix 29
AD2
B
121 129Right-handed alpha
Helix 30
AD3
B
129 137Right-handed alpha
Helix 31
AD4
B
144 164Right-handed alpha
Helix 32
AD5
B
164 213Right-handed alpha
Helix 33
AD6
B
213 220Right-handed alpha
Helix 34
AD7
B
223 250Right-handed alpha
Helix 35
AD8
B
250 270Right-handed alpha
Helix 36
AD9
B
274 278Right-handed 310
Helix 37
AE1
B
280 324Right-handed alpha
Helix 38
AE2
B
381 389Right-handed alpha
Helix 39
AE3
B
411 418Right-handed alpha
Helix 40
AE4
B
432 438Right-handed alpha
Helix 41
AE5
B
446 457Right-handed alpha
Helix 42
AE6
B
459 465Right-handed alpha
Helix 43
AE7
B
468 472Right-handed 310
Helix 44
AE8
B
482 498Right-handed alpha
Helix 45
AE9
B
515 527Right-handed alpha
Helix 46
AF1
B
538 543Right-handed alpha
Helix 47
AF2
B
561 568Right-handed alpha
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There are 5 sheets in PDB entry 9FV4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 365first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
397 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 374first strand
Strand 2
A
547 552parallel
Strand 3
A
555 559anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 344first strand
Strand 2
B
400 402anti-parallel
Strand 3
B
405 406anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
374 375first strand
Strand 2
B
548 552parallel
Strand 3
B
555 560anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 504parallel
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