Analysis of interatomic Contacts of Structural Units in PDB entry:
9FV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FV7 entry

There are 2 chains in PDB entry 9FV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 THR 12PHE 580
A
 THR 12PHE 580
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 9FV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
17 21Right-handed 310
Helix 2
AA2
B
23 47Right-handed alpha
Helix 3
AA3
B
47 54Right-handed alpha
Helix 4
AA4
B
61 107Right-handed alpha
Helix 5
AA5
B
112 117Right-handed 310
Helix 6
AA6
B
121 129Right-handed alpha
Helix 7
AA7
B
129 164Right-handed alpha
Helix 8
AA8
B
164 206Right-handed alpha
Helix 9
AA9
B
206 219Right-handed alpha
Helix 10
AB1
B
222 250Right-handed alpha
Helix 11
AB2
B
250 269Right-handed alpha
Helix 12
AB3
B
281 303Right-handed alpha
Helix 13
AB4
B
303 324Right-handed alpha
Helix 14
AB5
B
381 389Right-handed alpha
Helix 15
AB6
B
411 418Right-handed alpha
Helix 16
AB7
B
432 438Right-handed alpha
Helix 17
AB8
B
446 457Right-handed alpha
Helix 18
AB9
B
459 466Right-handed alpha
Helix 19
AC1
B
468 472Right-handed 310
Helix 20
AC2
B
482 498Right-handed alpha
Helix 21
AC3
B
514 527Right-handed alpha
Helix 22
AC4
B
538 545Right-handed alpha
Helix 23
AC5
B
571 580Right-handed alpha
Helix 24
AC6
A
16 21Right-handed alpha
Helix 25
AC7
A
23 53Right-handed alpha
Helix 26
AC8
A
62 111Right-handed alpha
Helix 27
AC9
A
112 116Right-handed 310
Helix 28
AD1
A
122 129Right-handed alpha
Helix 29
AD2
A
129 163Right-handed alpha
Helix 30
AD3
A
164 197Right-handed alpha
Helix 31
AD4
A
198 213Right-handed alpha
Helix 32
AD5
A
213 221Right-handed alpha
Helix 33
AD6
A
222 250Right-handed alpha
Helix 34
AD7
A
250 271Right-handed alpha
Helix 35
AD8
A
284 295Right-handed alpha
Helix 36
AD9
A
296 302Right-handed alpha
Helix 37
AE1
A
303 323Right-handed alpha
Helix 38
AE2
A
384 389Right-handed alpha
Helix 39
AE3
A
411 418Right-handed alpha
Helix 40
AE4
A
432 438Right-handed alpha
Helix 41
AE5
A
446 458Right-handed alpha
Helix 42
AE6
A
459 466Right-handed alpha
Helix 43
AE7
A
482 498Right-handed alpha
Helix 44
AE8
A
515 528Right-handed alpha
Helix 45
AE9
A
538 544Right-handed alpha
Helix 46
AF1
A
561 568Right-handed alpha
Helix 47
AF2
A
571 580Right-handed alpha
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There are 6 sheets in PDB entry 9FV7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
342 348anti-parallel
Strand 3
B
397 402anti-parallel
Strand 4
B
405 406anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
532 535first strand
Strand 2
B
371 375parallel
Strand 3
B
547 552parallel
Strand 4
B
555 560anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 504parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
342 345anti-parallel
Strand 3
A
399 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
359 362anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 421first strand
Strand 2
A
501 504parallel
Strand 3
A
532 535parallel
Strand 4
A
371 374parallel
Strand 5
A
547 552parallel
Strand 6
A
555 560anti-parallel
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