Analysis of interatomic Contacts of Structural Units in PDB entry:
9FV8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FV8 entry

There are 2 chains in PDB entry 9FV8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12PHE 580
B
 THR 12PHE 580
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 9FV8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 21Right-handed alpha
Helix 2
AA2
A
34 39Right-handed alpha
Helix 3
AA3
A
47 53Right-handed alpha
Helix 4
AA4
A
62 91Right-handed alpha
Helix 5
AA5
A
97 105Right-handed alpha
Helix 6
AA6
A
112 116Right-handed 310
Helix 7
AA7
A
121 127Right-handed 310
Helix 8
AA8
A
147 163Right-handed alpha
Helix 9
AA9
A
164 209Right-handed alpha
Helix 10
AB1
A
213 221Right-handed alpha
Helix 11
AB2
A
234 238Right-handed 310
Helix 12
AB3
A
250 259Right-handed alpha
Helix 13
AB4
A
260 270Right-handed alpha
Helix 14
AB5
A
284 290Right-handed alpha
Helix 15
AB6
A
294 302Right-handed alpha
Helix 16
AB7
A
303 305Right-handed 310
Helix 17
AB8
A
313 323Right-handed alpha
Helix 18
AB9
A
383 390Right-handed alpha
Helix 19
AC1
A
411 416Right-handed alpha
Helix 20
AC2
A
432 438Right-handed alpha
Helix 21
AC3
A
446 457Right-handed alpha
Helix 22
AC4
A
459 465Right-handed alpha
Helix 23
AC5
A
482 498Right-handed alpha
Helix 24
AC6
A
515 527Right-handed alpha
Helix 25
AC7
A
538 545Right-handed alpha
Helix 26
AC8
A
562 568Right-handed alpha
Helix 27
AC9
A
571 580Right-handed alpha
Helix 28
AD1
B
16 21Right-handed alpha
Helix 29
AD2
B
34 39Right-handed alpha
Helix 30
AD3
B
44 46Right-handed 310
Helix 31
AD4
B
47 54Right-handed alpha
Helix 32
AD5
B
62 73Right-handed alpha
Helix 33
AD6
B
76 84Right-handed alpha
Helix 34
AD7
B
91 105Right-handed alpha
Helix 35
AD8
B
113 118Right-handed alpha
Helix 36
AD9
B
124 128Right-handed 310
Helix 37
AE1
B
140 149Right-handed alpha
Helix 38
AE2
B
151 164Right-handed alpha
Helix 39
AE3
B
164 212Right-handed alpha
Helix 40
AE4
B
213 221Right-handed alpha
Helix 41
AE5
B
222 228Right-handed alpha
Helix 42
AE6
B
234 239Right-handed alpha
Helix 43
AE7
B
244 249Right-handed alpha
Helix 44
AE8
B
250 272Right-handed alpha
Helix 45
AE9
B
282 293Right-handed alpha
Helix 46
AF1
B
295 300Right-handed alpha
Helix 47
AF2
B
303 308Right-handed alpha
Helix 48
AF3
B
312 317Right-handed alpha
Helix 49
AF4
B
317 322Right-handed alpha
Helix 50
AF5
B
381 390Right-handed alpha
Helix 51
AF6
B
411 417Right-handed alpha
Helix 52
AF7
B
446 457Right-handed alpha
Helix 53
AF8
B
459 465Right-handed alpha
Helix 54
AF9
B
482 498Right-handed alpha
Helix 55
AG1
B
515 527Right-handed alpha
Helix 56
AG2
B
538 544Right-handed alpha
Helix 57
AG3
B
561 568Right-handed alpha
Helix 58
AG4
B
570 580Right-handed alpha
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There are 4 sheets in PDB entry 9FV8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 366first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
397 402anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
501 504parallel
Strand 3
A
532 535parallel
Strand 4
A
371 374parallel
Strand 5
A
547 549parallel
Strand 6
A
559 561anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
397 402anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
501 504parallel
Strand 3
B
531 535parallel
Strand 4
B
371 375parallel
Strand 5
B
547 550parallel
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