Analysis of interatomic Contacts of Structural Units in PDB entry:
9FV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FV9 entry

There are 2 chains in PDB entry 9FV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 12PHE 580
B
 THR 12PHE 580
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 9FV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 24Right-handed 310
Helix 2
AA2
A
25 30Right-handed alpha
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
47 53Right-handed alpha
Helix 5
AA5
A
67 72Right-handed alpha
Helix 6
AA6
A
72 80Right-handed alpha
Helix 7
AA7
A
83 88Right-handed alpha
Helix 8
AA8
A
97 105Right-handed alpha
Helix 9
AA9
A
112 117Right-handed alpha
Helix 10
AB1
A
124 128Right-handed 310
Helix 11
AB2
A
147 150Right-handed 310
Helix 12
AB3
A
151 163Right-handed alpha
Helix 13
AB4
A
164 209Right-handed alpha
Helix 14
AB5
A
210 212Right-handed 310
Helix 15
AB6
A
213 218Right-handed alpha
Helix 16
AB7
A
224 229Right-handed alpha
Helix 17
AB8
A
229 235Right-handed alpha
Helix 18
AB9
A
241 248Right-handed alpha
Helix 19
AC1
A
250 270Right-handed alpha
Helix 20
AC2
A
284 292Right-handed alpha
Helix 21
AC3
A
294 302Right-handed alpha
Helix 22
AC4
A
303 305Right-handed 310
Helix 23
AC5
A
381 390Right-handed alpha
Helix 24
AC6
A
411 417Right-handed alpha
Helix 25
AC7
A
432 437Right-handed alpha
Helix 26
AC8
A
446 457Right-handed alpha
Helix 27
AC9
A
459 465Right-handed alpha
Helix 28
AD1
A
482 498Right-handed alpha
Helix 29
AD2
A
515 527Right-handed alpha
Helix 30
AD3
A
561 568Right-handed alpha
Helix 31
AD4
A
571 578Right-handed alpha
Helix 32
AD5
B
16 21Right-handed alpha
Helix 33
AD6
B
24 30Right-handed alpha
Helix 34
AD7
B
44 46Right-handed 310
Helix 35
AD8
B
47 54Right-handed alpha
Helix 36
AD9
B
62 81Right-handed alpha
Helix 37
AE1
B
83 88Right-handed alpha
Helix 38
AE2
B
103 111Right-handed 310
Helix 39
AE3
B
124 128Right-handed 310
Helix 40
AE4
B
133 138Right-handed alpha
Helix 41
AE5
B
143 149Right-handed alpha
Helix 42
AE6
B
151 164Right-handed alpha
Helix 43
AE7
B
164 210Right-handed alpha
Helix 44
AE8
B
213 218Right-handed alpha
Helix 45
AE9
B
223 229Right-handed alpha
Helix 46
AF1
B
230 239Right-handed alpha
Helix 47
AF2
B
242 249Right-handed alpha
Helix 48
AF3
B
250 270Right-handed alpha
Helix 49
AF4
B
284 289Right-handed alpha
Helix 50
AF5
B
290 294Right-handed 310
Helix 51
AF6
B
295 300Right-handed alpha
Helix 52
AF7
B
301 304Right-handed 310
Helix 53
AF8
B
312 322Right-handed alpha
Helix 54
AF9
B
382 390Right-handed alpha
Helix 55
AG1
B
411 417Right-handed alpha
Helix 56
AG2
B
432 437Right-handed alpha
Helix 57
AG3
B
446 457Right-handed alpha
Helix 58
AG4
B
459 465Right-handed alpha
Helix 59
AG5
B
482 498Right-handed alpha
Helix 60
AG6
B
515 527Right-handed alpha
Helix 61
AG7
B
538 545Right-handed alpha
Helix 62
AG8
B
561 568Right-handed alpha
Helix 63
AG9
B
571 580Right-handed alpha
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There are 7 sheets in PDB entry 9FV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
342 344anti-parallel
Strand 3
A
400 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 349first strand
Strand 2
A
359 362anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 536first strand
Strand 2
A
371 375parallel
Strand 3
A
547 552parallel
Strand 4
A
555 560anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
421 422first strand
Strand 2
A
503 504parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
365 366anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 362first strand
Strand 2
B
342 349anti-parallel
Strand 3
B
397 402anti-parallel
Strand 4
B
405 406anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 420first strand
Strand 2
B
501 504parallel
Strand 3
B
531 534parallel
Strand 4
B
371 375parallel
Strand 5
B
547 552parallel
Strand 6
B
555 560anti-parallel
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