Analysis of interatomic Contacts of Structural Units in PDB entry:
9FVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FVR entry

There are 4 chains in PDB entry 9FVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1HIS 150
B
 MSE 1ASP 149
C
 MSE 1HIS 153
D
 MSE 1HIS 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9FVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 74Right-handed alpha
Helix 2
AA2
A
80 98Right-handed alpha
Helix 3
AA3
A
105 120Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
A
137 149Right-handed alpha
Helix 6
AA6
B
20 22Right-handed 310
Helix 7
AA7
B
62 74Right-handed alpha
Helix 8
AA8
B
80 98Right-handed alpha
Helix 9
AA9
B
105 120Right-handed alpha
Helix 10
AB1
B
120 132Right-handed alpha
Helix 11
AB2
B
137 148Right-handed alpha
Helix 12
AB3
C
62 74Right-handed alpha
Helix 13
AB4
C
80 98Right-handed alpha
Helix 14
AB5
C
105 120Right-handed alpha
Helix 15
AB6
C
120 132Right-handed alpha
Helix 16
AB7
C
137 153Right-handed alpha
Helix 17
AB8
D
62 74Right-handed alpha
Helix 18
AB9
D
80 98Right-handed alpha
Helix 19
AC1
D
105 120Right-handed alpha
Helix 20
AC2
D
120 132Right-handed alpha
Helix 21
AC3
D
137 149Right-handed alpha
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There are 6 sheets in PDB entry 9FVR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 18first strand
Strand 2
A
24 31anti-parallel
Strand 3
A
37 44anti-parallel
Strand 4
D
37 45anti-parallel
Strand 5
D
24 31anti-parallel
Strand 6
D
11 19anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
50 52anti-parallel
Strand 3
A
102 104parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 19first strand
Strand 2
B
24 31anti-parallel
Strand 3
B
37 44anti-parallel
Strand 4
C
37 44anti-parallel
Strand 5
C
24 31anti-parallel
Strand 6
C
11 19anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
50 52anti-parallel
Strand 3
B
102 104parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 59first strand
Strand 2
C
50 52anti-parallel
Strand 3
C
102 104parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 59first strand
Strand 2
D
50 52anti-parallel
Strand 3
D
102 104parallel
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