Analysis of interatomic Contacts of Structural Units in PDB entry:
9FWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FWF entry

There are 4 chains in PDB entry 9FWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 14LEU 258
B
 ASN 14LEU 258
C
 ASN 14THR 257
D
 ASN 14LEU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9FWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 35Right-handed alpha
Helix 2
AA2
A
116 120Right-handed 310
Helix 3
AA3
A
124 128Right-handed 310
Helix 4
AA4
A
130 134Right-handed 310
Helix 5
AA5
A
136 148Right-handed alpha
Helix 6
AA6
A
150 154Right-handed 310
Helix 7
AA7
A
159 183Right-handed alpha
Helix 8
AA8
A
200 208Right-handed alpha
Helix 9
AA9
A
208 226Right-handed alpha
Helix 10
AB1
A
226 243Right-handed alpha
Helix 11
AB2
B
17 35Right-handed alpha
Helix 12
AB3
B
116 120Right-handed 310
Helix 13
AB4
B
122 127Right-handed alpha
Helix 14
AB5
B
136 153Right-handed alpha
Helix 15
AB6
B
159 184Right-handed alpha
Helix 16
AB7
B
195 226Right-handed alpha
Helix 17
AB8
B
227 243Right-handed alpha
Helix 18
AB9
B
244 248Right-handed 310
Helix 19
AC1
C
18 35Right-handed alpha
Helix 20
AC2
C
122 127Right-handed alpha
Helix 21
AC3
C
130 134Right-handed 310
Helix 22
AC4
C
136 146Right-handed alpha
Helix 23
AC5
C
159 184Right-handed alpha
Helix 24
AC6
C
199 226Right-handed alpha
Helix 25
AC7
C
226 243Right-handed alpha
Helix 26
AC8
C
244 248Right-handed 310
Helix 27
AC9
D
18 35Right-handed alpha
Helix 28
AD1
D
117 121Right-handed 310
Helix 29
AD2
D
130 134Right-handed 310
Helix 30
AD3
D
136 148Right-handed alpha
Helix 31
AD4
D
148 153Right-handed alpha
Helix 32
AD5
D
159 185Right-handed alpha
Helix 33
AD6
D
198 226Right-handed alpha
Helix 34
AD7
D
226 243Right-handed alpha
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There are 7 sheets in PDB entry 9FWF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 50first strand
Strand 2
A
61 69anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
97 98anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 48first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
76 81anti-parallel
Strand 4
B
98 100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 50first strand
Strand 2
C
61 70anti-parallel
Strand 3
C
73 82anti-parallel
Strand 4
C
97 100anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 43first strand
Strand 2
D
67 70anti-parallel
Strand 3
D
74 76anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
47 48first strand
Strand 2
D
63 64anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 82first strand
Strand 2
D
97 100anti-parallel
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