Analysis of interatomic Contacts of Structural Units in PDB entry:
9FXB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FXB entry

There are 4 chains in PDB entry 9FXB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 20	GLN 159
C	GLY 1	GLU 205
I	THR 7	GLN 160
D	SER 121	ARG 833

There are 11 helices in PDB entry 9FXB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	79	83	Right-handed 310
Helix 2	AA2	C	123	128	Right-handed alpha
Helix 3	AA3	I	30	32	Right-handed 310
Helix 4	AA4	I	65	71	Right-handed alpha
Helix 5	AA5	D	129	133	Right-handed 310
Helix 6	AA6	D	246	250	Right-handed 310
Helix 7	AA7	D	443	448	Right-handed alpha
Helix 8	AA8	D	558	560	Right-handed 310
Helix 9	AA9	D	567	570	Right-handed 310
Helix 10	AB1	D	716	720	Right-handed 310
Helix 11	AB2	D	817	823	Right-handed alpha

There are 18 sheets in PDB entry 9FXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	23	first strand
Strand 2	A	52	61	anti-parallel
Strand 3	A	127	144	anti-parallel
Strand 4	A	97	104	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	38	first strand
Strand 2	I	8	20	parallel
Strand 3	A	146	159	anti-parallel
Strand 4	A	68	74	anti-parallel
Strand 5	A	114	118	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	38	first strand
Strand 2	I	8	20	parallel
Strand 3	A	146	159	anti-parallel
Strand 4	A	68	74	anti-parallel
Strand 5	A	122	123	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	4	first strand
Strand 2	C	17	24	anti-parallel
Strand 3	C	61	69	anti-parallel
Strand 4	C	48	51	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	12	first strand
Strand 2	C	102	116	parallel
Strand 3	I	34	36	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	30	38	anti-parallel
Strand 3	C	81	90	anti-parallel
Strand 4	C	102	116	anti-parallel
Strand 5	I	151	159	parallel
Strand 6	I	72	78	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	176	first strand
Strand 2	C	139	144	anti-parallel
Strand 3	C	132	135	anti-parallel
Strand 4	C	203	204	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	150	157	anti-parallel
Strand 3	C	165	167	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	150	157	anti-parallel
Strand 3	C	185	189	anti-parallel
Strand 4	C	200	201	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	25	28	first strand
Strand 2	I	55	62	anti-parallel
Strand 3	I	130	138	anti-parallel
Strand 4	I	101	105	anti-parallel
Strand 5	I	88	89	anti-parallel

Back to list of sheets
Back to top of page

There are 26 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	662	666	first strand
Strand 2	D	647	659	anti-parallel
Strand 3	D	634	640	anti-parallel
Strand 4	D	623	629	anti-parallel
Strand 5	D	603	612	anti-parallel
Strand 6	D	586	595	anti-parallel
Strand 7	D	572	579	anti-parallel
Strand 8	D	548	556	anti-parallel
Strand 9	D	528	535	anti-parallel
Strand 10	D	514	525	anti-parallel
Strand 11	D	496	505	anti-parallel
Strand 12	D	482	492	anti-parallel
Strand 13	D	428	437	anti-parallel
Strand 14	D	408	419	anti-parallel
Strand 15	D	391	402	anti-parallel
Strand 16	D	375	385	anti-parallel
Strand 17	D	363	371	anti-parallel
Strand 18	D	349	359	anti-parallel
Strand 19	D	329	338	anti-parallel
Strand 20	D	231	240	anti-parallel
Strand 21	D	214	223	anti-parallel
Strand 22	D	199	209	anti-parallel
Strand 23	D	176	186	anti-parallel
Strand 24	D	161	171	anti-parallel
Strand 25	D	139	151	anti-parallel
Strand 26	D	647	659	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	283	284	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	277	first strand
Strand 2	D	267	268	anti-parallel
Strand 3	D	298	302	anti-parallel
Strand 4	D	312	316	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	699	702	first strand
Strand 2	D	673	677	anti-parallel
Strand 3	D	740	744	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	714	first strand
Strand 2	D	730	733	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	725	726	first strand
Strand 2	D	747	748	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	786	792	first strand
Strand 2	D	751	756	anti-parallel
Strand 3	D	826	829	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	777	780	first strand
Strand 2	D	769	772	anti-parallel
Strand 3	D	795	801	anti-parallel
Strand 4	D	810	815	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FXB

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FXB