Analysis of interatomic Contacts of Structural Units in PDB entry:
9FXR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9FXR entry

There are 16 chains in PDB entry 9FXR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 9	ALA 182
A	TYR 184	LYS 334
B	SER 9	ALA 182
B	TYR 184	LEU 333
C	SER 9	ALA 182
C	TYR 184	LEU 333
D	SER 9	ALA 182
D	TYR 184	LEU 333
H	SER 9	ALA 182
H	TYR 184	LEU 333
J	THR 8	ALA 182
J	TYR 184	LYS 334
L	SER 9	ALA 182
L	TYR 184	LEU 333
N	SER 9	ALA 182
N	TYR 184	LYS 334

There are128 helices in PDB entry 9FXR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	16	Right-handed 310
Helix 2	AA2	A	41	56	Right-handed alpha
Helix 3	AA3	A	73	89	Right-handed alpha
Helix 4	AA4	A	102	117	Right-handed alpha
Helix 5	AA5	A	132	147	Right-handed alpha
Helix 6	AA6	A	157	162	Right-handed alpha
Helix 7	AA7	A	166	174	Right-handed alpha
Helix 8	AA8	A	189	197	Right-handed alpha
Helix 9	AA9	A	205	216	Right-handed alpha
Helix 10	AB1	A	226	231	Right-handed 310
Helix 11	AB2	A	232	249	Right-handed alpha
Helix 12	AB3	A	251	266	Right-handed alpha
Helix 13	AB4	A	269	272	Right-handed 310
Helix 14	AB5	A	273	280	Right-handed alpha
Helix 15	AB6	A	280	293	Right-handed alpha
Helix 16	AB7	A	308	334	Right-handed alpha
Helix 17	AB8	B	12	16	Right-handed 310
Helix 18	AB9	B	41	56	Right-handed alpha
Helix 19	AC1	B	73	89	Right-handed alpha
Helix 20	AC2	B	102	117	Right-handed alpha
Helix 21	AC3	B	132	147	Right-handed alpha
Helix 22	AC4	B	157	162	Right-handed alpha
Helix 23	AC5	B	166	174	Right-handed alpha
Helix 24	AC6	B	189	197	Right-handed alpha
Helix 25	AC7	B	205	216	Right-handed alpha
Helix 26	AC8	B	226	231	Right-handed 310
Helix 27	AC9	B	232	249	Right-handed alpha
Helix 28	AD1	B	251	266	Right-handed alpha
Helix 29	AD2	B	269	272	Right-handed 310
Helix 30	AD3	B	273	280	Right-handed alpha
Helix 31	AD4	B	280	293	Right-handed alpha
Helix 32	AD5	B	308	333	Right-handed alpha
Helix 33	AD6	C	12	16	Right-handed 310
Helix 34	AD7	C	41	56	Right-handed alpha
Helix 35	AD8	C	73	89	Right-handed alpha
Helix 36	AD9	C	102	117	Right-handed alpha
Helix 37	AE1	C	132	147	Right-handed alpha
Helix 38	AE2	C	157	162	Right-handed alpha
Helix 39	AE3	C	166	174	Right-handed alpha
Helix 40	AE4	C	189	197	Right-handed alpha
Helix 41	AE5	C	205	216	Right-handed alpha
Helix 42	AE6	C	226	231	Right-handed 310
Helix 43	AE7	C	232	249	Right-handed alpha
Helix 44	AE8	C	251	266	Right-handed alpha
Helix 45	AE9	C	269	272	Right-handed 310
Helix 46	AF1	C	273	280	Right-handed alpha
Helix 47	AF2	C	280	293	Right-handed alpha
Helix 48	AF3	C	308	333	Right-handed alpha
Helix 49	AF4	D	12	16	Right-handed 310
Helix 50	AF5	D	41	56	Right-handed alpha
Helix 51	AF6	D	73	89	Right-handed alpha
Helix 52	AF7	D	102	117	Right-handed alpha
Helix 53	AF8	D	132	147	Right-handed alpha
Helix 54	AF9	D	157	162	Right-handed alpha
Helix 55	AG1	D	166	174	Right-handed alpha
Helix 56	AG2	D	189	197	Right-handed alpha
Helix 57	AG3	D	205	216	Right-handed alpha
Helix 58	AG4	D	226	231	Right-handed 310
Helix 59	AG5	D	232	249	Right-handed alpha
Helix 60	AG6	D	251	266	Right-handed alpha
Helix 61	AG7	D	269	272	Right-handed 310
Helix 62	AG8	D	273	280	Right-handed alpha
Helix 63	AG9	D	280	293	Right-handed alpha
Helix 64	AH1	D	308	333	Right-handed alpha
Helix 65	AH2	H	12	16	Right-handed 310
Helix 66	AH3	H	41	56	Right-handed alpha
Helix 67	AH4	H	73	89	Right-handed alpha
Helix 68	AH5	H	102	117	Right-handed alpha
Helix 69	AH6	H	132	147	Right-handed alpha
Helix 70	AH7	H	157	162	Right-handed alpha
Helix 71	AH8	H	166	174	Right-handed alpha
Helix 72	AH9	H	189	197	Right-handed alpha
Helix 73	AI1	H	205	216	Right-handed alpha
Helix 74	AI2	H	226	231	Right-handed 310
Helix 75	AI3	H	232	249	Right-handed alpha
Helix 76	AI4	H	251	266	Right-handed alpha
Helix 77	AI5	H	269	272	Right-handed 310
Helix 78	AI6	H	273	280	Right-handed alpha
Helix 79	AI7	H	280	293	Right-handed alpha
Helix 80	AI8	H	308	333	Right-handed alpha
Helix 81	AI9	J	12	16	Right-handed 310
Helix 82	AJ1	J	41	56	Right-handed alpha
Helix 83	AJ2	J	73	89	Right-handed alpha
Helix 84	AJ3	J	102	117	Right-handed alpha
Helix 85	AJ4	J	132	147	Right-handed alpha
Helix 86	AJ5	J	157	162	Right-handed alpha
Helix 87	AJ6	J	166	174	Right-handed alpha
Helix 88	AJ7	J	189	197	Right-handed alpha
Helix 89	AJ8	J	205	216	Right-handed alpha
Helix 90	AJ9	J	226	231	Right-handed 310
Helix 91	AK1	J	232	249	Right-handed alpha
Helix 92	AK2	J	251	266	Right-handed alpha
Helix 93	AK3	J	269	272	Right-handed 310
Helix 94	AK4	J	273	280	Right-handed alpha
Helix 95	AK5	J	280	293	Right-handed alpha
Helix 96	AK6	J	308	334	Right-handed alpha
Helix 97	AK7	L	12	16	Right-handed 310
Helix 98	AK8	L	41	56	Right-handed alpha
Helix 99	AK9	L	73	89	Right-handed alpha
Helix 100	AL1	L	102	117	Right-handed alpha
Helix 101	AL2	L	132	147	Right-handed alpha
Helix 102	AL3	L	157	162	Right-handed alpha
Helix 103	AL4	L	166	174	Right-handed alpha
Helix 104	AL5	L	189	197	Right-handed alpha
Helix 105	AL6	L	205	216	Right-handed alpha
Helix 106	AL7	L	226	231	Right-handed 310
Helix 107	AL8	L	232	249	Right-handed alpha
Helix 108	AL9	L	251	266	Right-handed alpha
Helix 109	AM1	L	269	272	Right-handed 310
Helix 110	AM2	L	273	280	Right-handed alpha
Helix 111	AM3	L	280	293	Right-handed alpha
Helix 112	AM4	L	308	333	Right-handed alpha
Helix 113	AM5	N	12	16	Right-handed 310
Helix 114	AM6	N	41	56	Right-handed alpha
Helix 115	AM7	N	73	89	Right-handed alpha
Helix 116	AM8	N	102	117	Right-handed alpha
Helix 117	AM9	N	132	147	Right-handed alpha
Helix 118	AN1	N	157	162	Right-handed alpha
Helix 119	AN2	N	166	174	Right-handed alpha
Helix 120	AN3	N	189	197	Right-handed alpha
Helix 121	AN4	N	205	216	Right-handed alpha
Helix 122	AN5	N	226	231	Right-handed 310
Helix 123	AN6	N	232	249	Right-handed alpha
Helix 124	AN7	N	251	266	Right-handed alpha
Helix 125	AN8	N	269	272	Right-handed 310
Helix 126	AN9	N	273	280	Right-handed alpha
Helix 127	AO1	N	280	293	Right-handed alpha
Helix 128	AO2	N	308	334	Right-handed alpha

There are 8 sheets in PDB entry 9FXR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	179	183	parallel
Strand 3	A	151	155	parallel
Strand 4	A	120	123	parallel
Strand 5	A	94	97	parallel
Strand 6	A	59	62	parallel
Strand 7	A	18	23	parallel
Strand 8	A	222	225	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	179	183	parallel
Strand 3	B	151	155	parallel
Strand 4	B	120	123	parallel
Strand 5	B	94	97	parallel
Strand 6	B	59	62	parallel
Strand 7	B	18	23	parallel
Strand 8	B	222	225	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	203	first strand
Strand 2	C	179	183	parallel
Strand 3	C	151	155	parallel
Strand 4	C	120	123	parallel
Strand 5	C	94	97	parallel
Strand 6	C	59	62	parallel
Strand 7	C	18	23	parallel
Strand 8	C	222	225	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	201	203	first strand
Strand 2	D	179	183	parallel
Strand 3	D	151	155	parallel
Strand 4	D	120	123	parallel
Strand 5	D	94	97	parallel
Strand 6	D	59	62	parallel
Strand 7	D	18	23	parallel
Strand 8	D	222	225	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	201	203	first strand
Strand 2	H	179	183	parallel
Strand 3	H	151	155	parallel
Strand 4	H	120	123	parallel
Strand 5	H	94	97	parallel
Strand 6	H	59	62	parallel
Strand 7	H	18	23	parallel
Strand 8	H	222	225	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	201	203	first strand
Strand 2	J	179	183	parallel
Strand 3	J	151	155	parallel
Strand 4	J	120	123	parallel
Strand 5	J	94	97	parallel
Strand 6	J	59	62	parallel
Strand 7	J	18	23	parallel
Strand 8	J	222	225	parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	201	203	first strand
Strand 2	L	179	183	parallel
Strand 3	L	151	155	parallel
Strand 4	L	120	123	parallel
Strand 5	L	94	97	parallel
Strand 6	L	59	62	parallel
Strand 7	L	18	23	parallel
Strand 8	L	222	225	parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	201	203	first strand
Strand 2	N	179	183	parallel
Strand 3	N	151	155	parallel
Strand 4	N	120	123	parallel
Strand 5	N	94	97	parallel
Strand 6	N	59	62	parallel
Strand 7	N	18	23	parallel
Strand 8	N	222	225	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9FXR

Analysis of interatomic Contacts of Structural Units in PDB entry:
9FXR