Analysis of interatomic Contacts of Structural Units in PDB entry:
9FYE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FYE entry

There are 6 chains in PDB entry 9FYE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 59GLY 249
a
 GLY 272ILE 415
C
 PHE 59GLY 249
B
 PHE 59GLY 249
b
 GLY 272ILE 415
c
 GLY 272ILE 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 9FYE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 79Right-handed alpha
Helix 2
AA2
A
125 130Right-handed 310
Helix 3
AA3
A
136 151Right-handed alpha
Helix 4
AA4
A
187 201Right-handed alpha
Helix 5
AA5
A
232 243Right-handed alpha
Helix 6
AA6
a
289 295Right-handed alpha
Helix 7
AA7
a
296 298Right-handed 310
Helix 8
AA8
a
303 320Right-handed alpha
Helix 9
AA9
a
332 340Right-handed alpha
Helix 10
AB1
a
341 354Right-handed alpha
Helix 11
AB2
a
391 393Right-handed 310
Helix 12
AB3
a
394 415Right-handed alpha
Helix 13
AB4
C
74 79Right-handed alpha
Helix 14
AB5
C
125 130Right-handed 310
Helix 15
AB6
C
136 151Right-handed alpha
Helix 16
AB7
C
187 201Right-handed alpha
Helix 17
AB8
C
232 243Right-handed alpha
Helix 18
AB9
B
74 79Right-handed alpha
Helix 19
AC1
B
125 130Right-handed 310
Helix 20
AC2
B
136 151Right-handed alpha
Helix 21
AC3
B
187 201Right-handed alpha
Helix 22
AC4
B
232 243Right-handed alpha
Helix 23
AC5
b
289 295Right-handed alpha
Helix 24
AC6
b
296 298Right-handed 310
Helix 25
AC7
b
303 320Right-handed alpha
Helix 26
AC8
b
332 340Right-handed alpha
Helix 27
AC9
b
341 354Right-handed alpha
Helix 28
AD1
b
391 393Right-handed 310
Helix 29
AD2
b
394 415Right-handed alpha
Helix 30
AD3
c
289 295Right-handed alpha
Helix 31
AD4
c
296 298Right-handed 310
Helix 32
AD5
c
303 320Right-handed alpha
Helix 33
AD6
c
332 340Right-handed alpha
Helix 34
AD7
c
341 354Right-handed alpha
Helix 35
AD8
c
391 393Right-handed 310
Helix 36
AD9
c
394 415Right-handed alpha
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There are 10 sheets in PDB entry 9FYE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 71first strand
Strand 2
a
363 369anti-parallel
Strand 3
a
379 380anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
91 95anti-parallel
Strand 3
A
102 109anti-parallel
Strand 4
A
217 224anti-parallel
Strand 5
A
174 178anti-parallel
Strand 6
A
162 163anti-parallel
Strand 7
A
120 121anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
273 275first strand
Strand 2
a
286 288anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 71first strand
Strand 2
c
363 369anti-parallel
Strand 3
c
379 380anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 84first strand
Strand 2
C
91 95anti-parallel
Strand 3
C
102 109anti-parallel
Strand 4
C
217 224anti-parallel
Strand 5
C
174 178anti-parallel
Strand 6
C
162 163anti-parallel
Strand 7
C
120 121anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 71first strand
Strand 2
b
363 369anti-parallel
Strand 3
b
379 380anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
91 95anti-parallel
Strand 3
B
102 109anti-parallel
Strand 4
B
217 224anti-parallel
Strand 5
B
174 178anti-parallel
Strand 6
B
162 163anti-parallel
Strand 7
B
120 121anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
273 275first strand
Strand 2
b
286 288anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
273 275first strand
Strand 2
c
286 288anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
383 384first strand
Strand 2
c
387 388anti-parallel
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