Analysis of interatomic Contacts of Structural Units in PDB entry:
9FZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FZ3 entry

There is 1 chain in PDB entry 9FZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 23GLN 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 9FZ3. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
41 57Right-handed alpha
Helix 2
AA2
A
100 114Right-handed alpha
Helix 3
AA3
A
177 179Right-handed 310
Helix 4
AA4
A
226 245Right-handed alpha
Helix 5
AA5
A
258 273Right-handed alpha
Helix 6
AA6
A
287 298Right-handed alpha
Helix 7
AA7
A
306 320Right-handed alpha
Helix 8
AA8
A
324 328Right-handed 310
Helix 9
AA9
A
332 337Right-handed alpha
Helix 10
AB1
A
364 375Right-handed alpha
Helix 11
AB2
A
384 389Right-handed alpha
Helix 12
AB3
A
390 394Right-handed 310
Helix 13
AB4
A
398 412Right-handed alpha
Helix 14
AB5
A
459 463Right-handed 310
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There are 5 sheets in PDB entry 9FZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
28 30first strand
Strand 2
A
60 63parallel
Strand 3
A
117 122parallel
Strand 4
A
248 251parallel
Strand 5
A
278 281parallel
Strand 6
A
303 305parallel
Strand 7
A
341 343parallel
Strand 8
A
379 383parallel
Strand 9
A
28 30parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
126 127first strand
Strand 2
A
220 222anti-parallel
Strand 3
A
181 187anti-parallel
Strand 4
A
192 198anti-parallel
Strand 5
A
132 142anti-parallel
Strand 6
A
145 149anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
126 127first strand
Strand 2
A
220 222anti-parallel
Strand 3
A
181 187anti-parallel
Strand 4
A
192 198anti-parallel
Strand 5
A
132 142anti-parallel
Strand 6
A
154 161anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
417 420first strand
Strand 2
A
426 431anti-parallel
Strand 3
A
442 447anti-parallel
Strand 4
A
494 499anti-parallel
Strand 5
A
466 469anti-parallel
Strand 6
A
477 479anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
452 457first strand
Strand 2
A
485 490anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il