Analysis of interatomic Contacts of Structural Units in PDB entry:
9FZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FZ8 entry

There is 1 chain in PDB entry 9FZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PRO 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9FZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 41Right-handed alpha
Helix 2
AA2
A
42 45Right-handed 310
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
A
57 68Right-handed alpha
Helix 5
AA5
A
81 90Right-handed alpha
Helix 6
AA6
A
108 111Right-handed 310
Helix 7
AA7
A
112 117Right-handed alpha
Helix 8
AA8
A
127 133Right-handed alpha
Helix 9
AA9
A
133 139Right-handed alpha
Helix 10
AB1
A
175 194Right-handed alpha
Helix 11
AB2
A
234 239Right-handed alpha
Helix 12
AB3
A
243 246Right-handed 310
Helix 13
AB4
A
247 258Right-handed alpha
Helix 14
AB5
A
293 300Right-handed alpha
Helix 15
AB6
A
301 313Right-handed alpha
Helix 16
AB7
A
313 324Right-handed alpha
Helix 17
AB8
A
349 358Right-handed alpha
Helix 18
AB9
A
365 378Right-handed alpha
Helix 19
AC1
A
401 418Right-handed alpha
Helix 20
AC2
A
422 426Right-handed 310
Helix 21
AC3
A
489 504Right-handed alpha
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There are 7 sheets in PDB entry 9FZ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 9first strand
Strand 2
A
142 148anti-parallel
Strand 3
A
154 162anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 80first strand
Strand 2
A
23 35anti-parallel
Strand 3
A
96 105anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 80first strand
Strand 2
A
23 35anti-parallel
Strand 3
A
16 17anti-parallel
Strand 4
A
170 171parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 216first strand
Strand 2
A
197 204anti-parallel
Strand 3
A
469 476anti-parallel
Strand 4
A
454 462anti-parallel
Strand 5
A
433 440anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 268first strand
Strand 2
A
290 292anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
279 282anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 382first strand
Strand 2
A
397 398anti-parallel
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