Analysis of interatomic Contacts of Structural Units in PDB entry:
9FZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9FZQ entry

There are 3 chains in PDB entry 9FZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 10LYS 298
B
 GLN 4PRO 127
C
 VAL 5PRO 131
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9FZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 47Right-handed alpha
Helix 2
AA2
A
57 69Right-handed alpha
Helix 3
AA3
A
70 76Right-handed alpha
Helix 4
AA4
A
77 95Right-handed alpha
Helix 5
AA5
A
95 106Right-handed alpha
Helix 6
AA6
A
111 144Right-handed alpha
Helix 7
AA7
A
156 173Right-handed alpha
Helix 8
AA8
A
176 205Right-handed alpha
Helix 9
AA9
A
211 243Right-handed alpha
Helix 10
AB1
A
250 262Right-handed alpha
Helix 11
AB2
A
265 269Right-handed 310
Helix 12
AB3
A
270 298Right-handed alpha
Helix 13
AB4
B
31 35Right-handed 310
Helix 14
AB5
B
90 94Right-handed 310
Helix 15
AB6
B
110 114Right-handed 310
Helix 16
AB7
C
89 93Right-handed 310
Helix 17
AB8
C
108 118Right-handed 310
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There are 6 sheets in PDB entry 9FZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
21 28anti-parallel
Strand 3
B
81 86anti-parallel
Strand 4
B
71 76anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
121 124parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
36 42anti-parallel
Strand 5
B
49 54anti-parallel
Strand 6
B
61 63anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
121 124parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
116 117anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
21 28anti-parallel
Strand 3
C
80 85anti-parallel
Strand 4
C
70 75anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
125 128parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
36 42anti-parallel
Strand 5
C
48 54anti-parallel
Strand 6
C
60 62anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 14first strand
Strand 2
C
125 128parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
120 121anti-parallel
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