Analysis of interatomic Contacts of Structural Units in PDB entry:
9G00

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G00 entry

There are 6 chains in PDB entry 9G00 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	MET 708
E	PHE 2	GLY 314
F	GLY 5	GLU 446
A	MET 1	ILE 290
B	LYS 4	ILE 631
C	LYS 4	ILE 631

There are147 helices in PDB entry 9G00. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	2	30	Right-handed alpha
Helix 2	AA2	D	44	52	Right-handed alpha
Helix 3	AA3	D	57	64	Right-handed alpha
Helix 4	AA4	D	64	71	Right-handed alpha
Helix 5	AA5	D	77	103	Right-handed alpha
Helix 6	AA6	D	116	130	Right-handed alpha
Helix 7	AA7	D	144	158	Right-handed alpha
Helix 8	AA8	D	167	175	Right-handed alpha
Helix 9	AA9	D	191	194	Right-handed 310
Helix 10	AB1	D	195	209	Right-handed alpha
Helix 11	AB2	D	216	228	Right-handed alpha
Helix 12	AB3	D	239	252	Right-handed alpha
Helix 13	AB4	D	277	286	Right-handed alpha
Helix 14	AB5	D	302	306	Right-handed 310
Helix 15	AB6	D	349	353	Right-handed 310
Helix 16	AB7	D	374	376	Right-handed 310
Helix 17	AB8	D	377	391	Right-handed alpha
Helix 18	AB9	D	400	403	Right-handed 310
Helix 19	AC1	D	410	414	Right-handed alpha
Helix 20	AC2	D	418	434	Right-handed alpha
Helix 21	AC3	D	448	459	Right-handed alpha
Helix 22	AC4	D	459	474	Right-handed alpha
Helix 23	AC5	D	511	522	Right-handed alpha
Helix 24	AC6	D	544	554	Right-handed alpha
Helix 25	AC7	D	585	588	Right-handed 310
Helix 26	AC8	D	606	615	Right-handed alpha
Helix 27	AC9	D	629	633	Right-handed 310
Helix 28	AD1	D	637	641	Right-handed 310
Helix 29	AD2	D	642	644	Right-handed 310
Helix 30	AD3	D	650	668	Right-handed alpha
Helix 31	AD4	D	673	678	Right-handed alpha
Helix 32	AD5	D	686	698	Right-handed alpha
Helix 33	AD6	D	699	704	Right-handed alpha
Helix 34	AD7	E	20	24	Right-handed 310
Helix 35	AD8	E	61	68	Right-handed alpha
Helix 36	AD9	E	74	87	Right-handed alpha
Helix 37	AE1	E	96	99	Right-handed 310
Helix 38	AE2	E	106	119	Right-handed alpha
Helix 39	AE3	E	132	147	Right-handed alpha
Helix 40	AE4	E	161	169	Right-handed alpha
Helix 41	AE5	E	169	174	Right-handed alpha
Helix 42	AE6	E	184	199	Right-handed alpha
Helix 43	AE7	E	217	234	Right-handed alpha
Helix 44	AE8	E	248	253	Right-handed alpha
Helix 45	AE9	E	255	260	Right-handed alpha
Helix 46	AF1	E	265	269	Right-handed 310
Helix 47	AF2	E	270	290	Right-handed alpha
Helix 48	AF3	E	298	314	Right-handed alpha
Helix 49	AF4	F	6	10	Right-handed alpha
Helix 50	AF5	F	24	35	Right-handed alpha
Helix 51	AF6	F	46	57	Right-handed alpha
Helix 52	AF7	F	103	117	Right-handed alpha
Helix 53	AF8	F	138	153	Right-handed alpha
Helix 54	AF9	F	164	172	Right-handed alpha
Helix 55	AG1	F	173	179	Right-handed 310
Helix 56	AG2	F	189	199	Right-handed alpha
Helix 57	AG3	F	210	225	Right-handed alpha
Helix 58	AG4	F	237	254	Right-handed alpha
Helix 59	AG5	F	268	272	Right-handed alpha
Helix 60	AG6	F	275	289	Right-handed alpha
Helix 61	AG7	F	300	315	Right-handed alpha
Helix 62	AG8	F	348	358	Right-handed alpha
Helix 63	AG9	F	375	383	Right-handed alpha
Helix 64	AH1	F	386	398	Right-handed alpha
Helix 65	AH2	F	398	403	Right-handed alpha
Helix 66	AH3	F	416	425	Right-handed alpha
Helix 67	AH4	F	436	438	Right-handed 310
Helix 68	AH5	F	439	445	Right-handed alpha
Helix 69	AH6	A	2	30	Right-handed alpha
Helix 70	AH7	A	44	52	Right-handed alpha
Helix 71	AH8	A	57	64	Right-handed alpha
Helix 72	AH9	A	64	71	Right-handed alpha
Helix 73	AI1	A	77	103	Right-handed alpha
Helix 74	AI2	A	116	130	Right-handed alpha
Helix 75	AI3	A	144	158	Right-handed alpha
Helix 76	AI4	A	167	175	Right-handed alpha
Helix 77	AI5	A	191	194	Right-handed 310
Helix 78	AI6	A	195	209	Right-handed alpha
Helix 79	AI7	A	216	228	Right-handed alpha
Helix 80	AI8	A	239	252	Right-handed alpha
Helix 81	AI9	A	277	286	Right-handed alpha
Helix 82	AJ1	B	9	23	Right-handed alpha
Helix 83	AJ2	B	26	35	Right-handed alpha
Helix 84	AJ3	B	38	44	Right-handed alpha
Helix 85	AJ4	B	73	106	Right-handed alpha
Helix 86	AJ5	B	117	128	Right-handed alpha
Helix 87	AJ6	B	136	154	Right-handed alpha
Helix 88	AJ7	B	166	177	Right-handed alpha
Helix 89	AJ8	B	182	194	Right-handed alpha
Helix 90	AJ9	B	201	218	Right-handed alpha
Helix 91	AK1	B	219	233	Right-handed alpha
Helix 92	AK2	B	243	247	Right-handed 310
Helix 93	AK3	B	260	272	Right-handed alpha
Helix 94	AK4	B	273	283	Right-handed alpha
Helix 95	AK5	B	294	305	Right-handed alpha
Helix 96	AK6	B	311	313	Right-handed 310
Helix 97	AK7	B	314	321	Right-handed alpha
Helix 98	AK8	B	336	343	Right-handed alpha
Helix 99	AK9	B	370	385	Right-handed alpha
Helix 100	AL1	B	386	389	Right-handed 310
Helix 101	AL2	B	390	394	Right-handed 310
Helix 102	AL3	B	408	417	Right-handed alpha
Helix 103	AL4	B	418	420	Right-handed 310
Helix 104	AL5	B	430	440	Right-handed alpha
Helix 105	AL6	B	459	472	Right-handed alpha
Helix 106	AL7	B	480	490	Right-handed alpha
Helix 107	AL8	B	494	501	Right-handed alpha
Helix 108	AL9	B	502	513	Right-handed alpha
Helix 109	AM1	B	525	541	Right-handed alpha
Helix 110	AM2	B	543	547	Right-handed 310
Helix 111	AM3	B	558	571	Right-handed alpha
Helix 112	AM4	B	586	595	Right-handed alpha
Helix 113	AM5	B	596	602	Right-handed alpha
Helix 114	AM6	B	610	630	Right-handed alpha
Helix 115	AM7	C	9	23	Right-handed alpha
Helix 116	AM8	C	26	35	Right-handed alpha
Helix 117	AM9	C	38	44	Right-handed alpha
Helix 118	AN1	C	73	106	Right-handed alpha
Helix 119	AN2	C	117	128	Right-handed alpha
Helix 120	AN3	C	136	154	Right-handed alpha
Helix 121	AN4	C	166	177	Right-handed alpha
Helix 122	AN5	C	182	194	Right-handed alpha
Helix 123	AN6	C	201	218	Right-handed alpha
Helix 124	AN7	C	219	233	Right-handed alpha
Helix 125	AN8	C	243	247	Right-handed 310
Helix 126	AN9	C	260	272	Right-handed alpha
Helix 127	AO1	C	273	283	Right-handed alpha
Helix 128	AO2	C	294	305	Right-handed alpha
Helix 129	AO3	C	311	313	Right-handed 310
Helix 130	AO4	C	314	321	Right-handed alpha
Helix 131	AO5	C	336	344	Right-handed alpha
Helix 132	AO6	C	370	385	Right-handed alpha
Helix 133	AO7	C	386	389	Right-handed 310
Helix 134	AO8	C	390	394	Right-handed 310
Helix 135	AO9	C	408	417	Right-handed alpha
Helix 136	AP1	C	418	420	Right-handed 310
Helix 137	AP2	C	430	440	Right-handed alpha
Helix 138	AP3	C	459	472	Right-handed alpha
Helix 139	AP4	C	480	490	Right-handed alpha
Helix 140	AP5	C	494	501	Right-handed alpha
Helix 141	AP6	C	502	513	Right-handed alpha
Helix 142	AP7	C	525	541	Right-handed alpha
Helix 143	AP8	C	543	547	Right-handed 310
Helix 144	AP9	C	558	572	Right-handed alpha
Helix 145	AQ1	C	586	595	Right-handed alpha
Helix 146	AQ2	C	596	602	Right-handed alpha
Helix 147	AQ3	C	610	630	Right-handed alpha

There are 21 sheets in PDB entry 9G00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	189	first strand
Strand 2	D	161	165	parallel
Strand 3	D	135	140	parallel
Strand 4	D	230	235	parallel
Strand 5	D	256	258	parallel
Strand 6	D	269	271	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	315	320	first strand
Strand 2	D	405	409	anti-parallel
Strand 3	D	395	398	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	332	first strand
Strand 2	D	362	369	parallel
Strand 3	D	440	446	anti-parallel
Strand 4	D	342	346	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	497	499	first strand
Strand 2	D	481	485	anti-parallel
Strand 3	D	528	531	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	537	first strand
Strand 2	D	542	543	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	623	626	first strand
Strand 2	D	579	584	anti-parallel
Strand 3	D	589	594	anti-parallel
Strand 4	D	646	648	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	16	18	first strand
Strand 2	E	25	27	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	205	208	first strand
Strand 2	E	176	180	parallel
Strand 3	E	153	157	parallel
Strand 4	E	125	128	parallel
Strand 5	E	90	94	parallel
Strand 6	E	47	53	parallel
Strand 7	E	293	296	parallel
Strand 8	E	245	247	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	63	66	first strand
Strand 2	F	73	76	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	229	231	first strand
Strand 2	F	203	206	parallel
Strand 3	F	181	185	parallel
Strand 4	F	157	161	parallel
Strand 5	F	130	134	parallel
Strand 6	F	93	99	parallel
Strand 7	F	293	296	parallel
Strand 8	F	265	267	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	118	121	first strand
Strand 2	F	124	127	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	327	330	first strand
Strand 2	F	365	368	anti-parallel
Strand 3	F	340	342	parallel
Strand 4	F	407	410	parallel
Strand 5	F	429	432	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	189	first strand
Strand 2	A	161	165	parallel
Strand 3	A	135	140	parallel
Strand 4	A	230	235	parallel
Strand 5	A	256	258	parallel
Strand 6	A	269	271	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	55	56	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	242	first strand
Strand 2	B	401	405	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	310	first strand
Strand 2	B	288	293	parallel
Strand 3	B	252	257	parallel
Strand 4	B	326	329	parallel
Strand 5	B	348	351	parallel
Strand 6	B	362	363	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	521	first strand
Strand 2	B	474	479	parallel
Strand 3	B	444	448	parallel
Strand 4	B	549	553	parallel
Strand 5	B	574	577	parallel
Strand 6	B	605	607	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	55	56	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	242	first strand
Strand 2	C	401	405	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	310	first strand
Strand 2	C	288	293	parallel
Strand 3	C	252	257	parallel
Strand 4	C	326	329	parallel
Strand 5	C	348	351	parallel
Strand 6	C	362	363	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	517	521	first strand
Strand 2	C	474	479	parallel
Strand 3	C	444	448	parallel
Strand 4	C	549	553	parallel
Strand 5	C	574	577	parallel
Strand 6	C	605	607	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G00

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G00