Analysis of interatomic Contacts of Structural Units in PDB entry:
9G02

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G02 entry

There are 4 chains in PDB entry 9G02 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	MET 1	ILE 707
A	MET 1	ILE 290
B	LYS 4	ILE 631
C	LYS 4	ILE 631

There are108 helices in PDB entry 9G02. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	2	30	Right-handed alpha
Helix 2	AA2	D	44	52	Right-handed alpha
Helix 3	AA3	D	57	64	Right-handed alpha
Helix 4	AA4	D	64	71	Right-handed alpha
Helix 5	AA5	D	77	103	Right-handed alpha
Helix 6	AA6	D	116	129	Right-handed alpha
Helix 7	AA7	D	144	158	Right-handed alpha
Helix 8	AA8	D	167	175	Right-handed alpha
Helix 9	AA9	D	191	194	Right-handed 310
Helix 10	AB1	D	195	209	Right-handed alpha
Helix 11	AB2	D	216	228	Right-handed alpha
Helix 12	AB3	D	239	252	Right-handed alpha
Helix 13	AB4	D	277	286	Right-handed alpha
Helix 14	AB5	D	302	306	Right-handed 310
Helix 15	AB6	D	374	376	Right-handed 310
Helix 16	AB7	D	377	391	Right-handed alpha
Helix 17	AB8	D	410	416	Right-handed alpha
Helix 18	AB9	D	419	434	Right-handed alpha
Helix 19	AC1	D	448	460	Right-handed alpha
Helix 20	AC2	D	460	473	Right-handed alpha
Helix 21	AC3	D	486	491	Right-handed 310
Helix 22	AC4	D	511	522	Right-handed alpha
Helix 23	AC5	D	544	554	Right-handed alpha
Helix 24	AC6	D	606	615	Right-handed alpha
Helix 25	AC7	D	642	644	Right-handed 310
Helix 26	AC8	D	650	667	Right-handed alpha
Helix 27	AC9	D	673	678	Right-handed alpha
Helix 28	AD1	D	686	698	Right-handed alpha
Helix 29	AD2	D	699	705	Right-handed alpha
Helix 30	AD3	A	2	30	Right-handed alpha
Helix 31	AD4	A	44	52	Right-handed alpha
Helix 32	AD5	A	57	64	Right-handed alpha
Helix 33	AD6	A	64	71	Right-handed alpha
Helix 34	AD7	A	77	103	Right-handed alpha
Helix 35	AD8	A	116	130	Right-handed alpha
Helix 36	AD9	A	144	158	Right-handed alpha
Helix 37	AE1	A	167	175	Right-handed alpha
Helix 38	AE2	A	191	194	Right-handed 310
Helix 39	AE3	A	195	209	Right-handed alpha
Helix 40	AE4	A	216	228	Right-handed alpha
Helix 41	AE5	A	239	252	Right-handed alpha
Helix 42	AE6	A	277	286	Right-handed alpha
Helix 43	AE7	B	9	23	Right-handed alpha
Helix 44	AE8	B	26	35	Right-handed alpha
Helix 45	AE9	B	38	44	Right-handed alpha
Helix 46	AF1	B	73	106	Right-handed alpha
Helix 47	AF2	B	117	128	Right-handed alpha
Helix 48	AF3	B	136	154	Right-handed alpha
Helix 49	AF4	B	166	177	Right-handed alpha
Helix 50	AF5	B	182	194	Right-handed alpha
Helix 51	AF6	B	201	218	Right-handed alpha
Helix 52	AF7	B	219	233	Right-handed alpha
Helix 53	AF8	B	243	247	Right-handed 310
Helix 54	AF9	B	260	272	Right-handed alpha
Helix 55	AG1	B	273	283	Right-handed alpha
Helix 56	AG2	B	294	305	Right-handed alpha
Helix 57	AG3	B	311	313	Right-handed 310
Helix 58	AG4	B	314	321	Right-handed alpha
Helix 59	AG5	B	336	343	Right-handed alpha
Helix 60	AG6	B	370	385	Right-handed alpha
Helix 61	AG7	B	386	389	Right-handed 310
Helix 62	AG8	B	390	394	Right-handed 310
Helix 63	AG9	B	408	417	Right-handed alpha
Helix 64	AH1	B	418	420	Right-handed 310
Helix 65	AH2	B	430	440	Right-handed alpha
Helix 66	AH3	B	459	472	Right-handed alpha
Helix 67	AH4	B	480	490	Right-handed alpha
Helix 68	AH5	B	494	501	Right-handed alpha
Helix 69	AH6	B	502	513	Right-handed alpha
Helix 70	AH7	B	525	541	Right-handed alpha
Helix 71	AH8	B	543	547	Right-handed 310
Helix 72	AH9	B	558	571	Right-handed alpha
Helix 73	AI1	B	586	595	Right-handed alpha
Helix 74	AI2	B	596	602	Right-handed alpha
Helix 75	AI3	B	610	630	Right-handed alpha
Helix 76	AI4	C	9	23	Right-handed alpha
Helix 77	AI5	C	26	35	Right-handed alpha
Helix 78	AI6	C	38	44	Right-handed alpha
Helix 79	AI7	C	73	106	Right-handed alpha
Helix 80	AI8	C	117	128	Right-handed alpha
Helix 81	AI9	C	136	154	Right-handed alpha
Helix 82	AJ1	C	166	177	Right-handed alpha
Helix 83	AJ2	C	182	194	Right-handed alpha
Helix 84	AJ3	C	201	218	Right-handed alpha
Helix 85	AJ4	C	219	233	Right-handed alpha
Helix 86	AJ5	C	243	247	Right-handed 310
Helix 87	AJ6	C	260	272	Right-handed alpha
Helix 88	AJ7	C	273	283	Right-handed alpha
Helix 89	AJ8	C	294	305	Right-handed alpha
Helix 90	AJ9	C	311	313	Right-handed 310
Helix 91	AK1	C	314	321	Right-handed alpha
Helix 92	AK2	C	336	344	Right-handed alpha
Helix 93	AK3	C	370	385	Right-handed alpha
Helix 94	AK4	C	386	389	Right-handed 310
Helix 95	AK5	C	390	394	Right-handed 310
Helix 96	AK6	C	408	417	Right-handed alpha
Helix 97	AK7	C	418	420	Right-handed 310
Helix 98	AK8	C	430	440	Right-handed alpha
Helix 99	AK9	C	459	472	Right-handed alpha
Helix 100	AL1	C	480	490	Right-handed alpha
Helix 101	AL2	C	494	501	Right-handed alpha
Helix 102	AL3	C	502	513	Right-handed alpha
Helix 103	AL4	C	525	541	Right-handed alpha
Helix 104	AL5	C	543	547	Right-handed 310
Helix 105	AL6	C	558	572	Right-handed alpha
Helix 106	AL7	C	586	595	Right-handed alpha
Helix 107	AL8	C	596	602	Right-handed alpha
Helix 108	AL9	C	610	630	Right-handed alpha

There are 15 sheets in PDB entry 9G02. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	189	first strand
Strand 2	D	161	165	parallel
Strand 3	D	135	140	parallel
Strand 4	D	230	235	parallel
Strand 5	D	256	258	parallel
Strand 6	D	269	271	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	315	320	first strand
Strand 2	D	405	409	anti-parallel
Strand 3	D	395	398	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	327	332	first strand
Strand 2	D	363	369	parallel
Strand 3	D	440	446	anti-parallel
Strand 4	D	342	346	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	497	499	first strand
Strand 2	D	481	485	anti-parallel
Strand 3	D	528	531	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	537	first strand
Strand 2	D	542	543	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	624	626	first strand
Strand 2	D	579	584	anti-parallel
Strand 3	D	589	594	anti-parallel
Strand 4	D	646	648	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	189	first strand
Strand 2	A	161	165	parallel
Strand 3	A	135	140	parallel
Strand 4	A	230	235	parallel
Strand 5	A	256	258	parallel
Strand 6	A	269	271	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	55	56	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	238	242	first strand
Strand 2	B	401	405	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	310	first strand
Strand 2	B	288	293	parallel
Strand 3	B	252	257	parallel
Strand 4	B	326	329	parallel
Strand 5	B	348	351	parallel
Strand 6	B	362	363	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	521	first strand
Strand 2	B	474	479	parallel
Strand 3	B	444	448	parallel
Strand 4	B	549	553	parallel
Strand 5	B	574	577	parallel
Strand 6	B	605	607	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	55	56	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	242	first strand
Strand 2	C	401	405	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	307	310	first strand
Strand 2	C	288	293	parallel
Strand 3	C	252	257	parallel
Strand 4	C	326	329	parallel
Strand 5	C	348	351	parallel
Strand 6	C	362	363	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	517	521	first strand
Strand 2	C	474	479	parallel
Strand 3	C	444	448	parallel
Strand 4	C	549	553	parallel
Strand 5	C	574	577	parallel
Strand 6	C	605	607	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G02

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G02