Analysis of interatomic Contacts of Structural Units in PDB entry:
9G08


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G08 entry

There are 2 chains in PDB entry 9G08 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 378ARG 5207
B
 CYS 37GLY 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are222 helices in PDB entry 9G08. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
441 443Right-handed 310
Helix 2
2
A
518 541Right-handed alpha
Helix 3
3
A
546 564Right-handed alpha
Helix 4
4
A
584 598Right-handed alpha
Helix 5
5
A
619 632Right-handed alpha
Helix 6
6
A
641 647Right-handed 310
Helix 7
7
A
655 666Right-handed alpha
Helix 8
8
A
672 685Right-handed alpha
Helix 9
9
A
690 693Right-handed 310
Helix 10
10
A
695 702Right-handed alpha
Helix 11
11
A
716 719Right-handed alpha
Helix 12
12
A
727 733Right-handed alpha
Helix 13
13
A
737 746Right-handed alpha
Helix 14
14
A
748 751Right-handed 310
Helix 15
15
A
756 764Right-handed 310
Helix 16
16
A
768 776Right-handed 310
Helix 17
17
A
778 783Right-handed alpha
Helix 18
18
A
785 807Right-handed 310
Helix 19
19
A
811 830Right-handed alpha
Helix 20
20
A
842 858Right-handed 310
Helix 21
21
A
863 880Right-handed 310
Helix 22
22
A
899 917Right-handed alpha
Helix 23
23
A
935 943Right-handed alpha
Helix 24
24
A
949 951Right-handed 310
Helix 25
25
A
953 966Right-handed alpha
Helix 26
26
A
970 979Right-handed alpha
Helix 27
27
A
982 985Right-handed 310
Helix 28
28
A
990 1009Right-handed alpha
Helix 29
29
A
1022 1036Right-handed alpha
Helix 30
30
A
1044 1053Right-handed alpha
Helix 31
31
A
1056 1066Right-handed alpha
Helix 32
32
A
1069 1073Right-handed alpha
Helix 33
33
A
1076 1098Right-handed alpha
Helix 34
34
A
1103 1111Right-handed alpha
Helix 35
35
A
1113 1126Right-handed alpha
Helix 36
36
A
1135 1169Right-handed alpha
Helix 37
37
A
1176 1183Right-handed alpha
Helix 38
38
A
1186 1188Right-handed 310
Helix 39
39
A
1191 1194Right-handed alpha
Helix 40
40
A
1215 1226Right-handed alpha
Helix 41
41
A
1231 1234Right-handed alpha
Helix 42
42
A
1271 1295Right-handed alpha
Helix 43
43
A
1300 1306Right-handed alpha
Helix 44
44
A
1314 1327Right-handed alpha
Helix 45
45
A
1335 1366Right-handed alpha
Helix 46
46
A
1373 1383Right-handed 310
Helix 47
47
A
1385 1390Right-handed alpha
Helix 48
48
A
1399 1409Right-handed alpha
Helix 49
49
A
1412 1422Right-handed alpha
Helix 50
50
A
1425 1434Right-handed alpha
Helix 51
51
A
1438 1451Right-handed 310
Helix 52
52
A
1456 1471Right-handed alpha
Helix 53
53
A
1473 1477Right-handed alpha
Helix 54
54
A
1485 1501Right-handed alpha
Helix 55
55
A
1505 1514Right-handed alpha
Helix 56
56
A
1516 1524Right-handed alpha
Helix 57
57
A
1533 1542Right-handed alpha
Helix 58
58
A
1559 1562Right-handed alpha
Helix 59
59
A
1582 1595Right-handed alpha
Helix 60
60
A
1601 1628Right-handed 310
Helix 61
61
A
1633 1635Right-handed 310
Helix 62
62
A
1669 1697Right-handed alpha
Helix 63
63
A
1700 1703Right-handed 310
Helix 64
64
A
1706 1716Right-handed alpha
Helix 65
65
A
1723 1731Right-handed alpha
Helix 66
66
A
1738 1744Right-handed alpha
Helix 67
67
A
1751 1770Right-handed alpha
Helix 68
68
A
1774 1787Right-handed alpha
Helix 69
69
A
1789 1791Right-handed 310
Helix 70
70
A
1799 1812Right-handed alpha
Helix 71
71
A
1837 1851Right-handed 310
Helix 72
72
A
1871 1882Right-handed alpha
Helix 73
73
A
1897 1899Right-handed 310
Helix 74
74
A
1902 1917Right-handed alpha
Helix 75
75
A
1932 1934Right-handed 310
Helix 76
76
A
1938 1942Right-handed alpha
Helix 77
77
A
1944 1946Right-handed 310
Helix 78
78
A
1956 1967Right-handed alpha
Helix 79
79
A
1976 1978Right-handed 310
Helix 80
80
A
1998 2012Right-handed alpha
Helix 81
81
A
2032 2043Right-handed alpha
Helix 82
82
A
2045 2047Right-handed 310
Helix 83
83
A
2066 2074Right-handed alpha
Helix 84
84
A
2123 2126Right-handed 310
Helix 85
85
A
2135 2141Right-handed alpha
Helix 86
86
A
2156 2159Right-handed alpha
Helix 87
87
A
2162 2175Right-handed alpha
Helix 88
88
A
2194 2205Right-handed alpha
Helix 89
89
A
2212 2231Right-handed alpha
Helix 90
90
A
2247 2263Right-handed alpha
Helix 91
91
A
2348 2356Right-handed alpha
Helix 92
92
A
2370 2381Right-handed alpha
Helix 93
93
A
2397 2412Right-handed alpha
Helix 94
94
A
2426 2438Right-handed alpha
Helix 95
95
A
2457 2477Right-handed alpha
Helix 96
96
A
2489 2491Right-handed 310
Helix 97
97
A
2493 2502Right-handed 310
Helix 98
98
A
2532 2540Right-handed alpha
Helix 99
99
A
2561 2563Right-handed 310
Helix 100
100
A
2573 2576Right-handed alpha
Helix 101
101
A
2587 2605Right-handed alpha
Helix 102
102
A
2609 2628Right-handed alpha
Helix 103
103
A
2639 2668Right-handed alpha
Helix 104
104
A
2680 2692Right-handed alpha
Helix 105
105
A
2700 2710Right-handed alpha
Helix 106
106
A
2718 2733Right-handed alpha
Helix 107
107
A
2746 2760Right-handed alpha
Helix 108
108
A
2775 2785Right-handed alpha
Helix 109
109
A
2794 2798Right-handed alpha
Helix 110
110
A
2815 2829Right-handed alpha
Helix 111
111
A
2846 2849Right-handed 310
Helix 112
112
A
2856 2865Right-handed 310
Helix 113
113
A
2875 2877Right-handed 310
Helix 114
114
A
2891 2894Right-handed 310
Helix 115
115
A
2907 2920Right-handed alpha
Helix 116
116
A
2922 2945Right-handed alpha
Helix 117
117
A
2953 2970Right-handed alpha
Helix 118
118
A
2976 2987Right-handed alpha
Helix 119
119
A
2995 3001Right-handed alpha
Helix 120
120
A
3005 3007Right-handed 310
Helix 121
121
A
3014 3022Right-handed alpha
Helix 122
122
A
3051 3058Right-handed alpha
Helix 123
123
A
3080 3096Right-handed alpha
Helix 124
124
A
3106 3117Right-handed 310
Helix 125
125
A
3154 3160Right-handed alpha
Helix 126
126
A
3163 3168Right-handed alpha
Helix 127
127
A
3176 3179Right-handed alpha
Helix 128
128
A
3182 3200Right-handed alpha
Helix 129
129
A
3214 3216Right-handed 310
Helix 130
130
A
3225 3237Right-handed alpha
Helix 131
131
A
3244 3261Right-handed alpha
Helix 132
132
A
3264 3274Right-handed alpha
Helix 133
133
A
3278 3288Right-handed alpha
Helix 134
134
A
3296 3306Right-handed alpha
Helix 135
135
A
3327 3337Right-handed alpha
Helix 136
136
A
3349 3351Right-handed 310
Helix 137
137
A
3355 3366Right-handed alpha
Helix 138
138
A
3388 3404Right-handed alpha
Helix 139
139
A
3458 3460Right-handed 310
Helix 140
140
A
3465 3467Right-handed 310
Helix 141
141
A
3532 3546Right-handed alpha
Helix 142
142
A
3556 3567Right-handed alpha
Helix 143
143
A
3573 3596Right-handed alpha
Helix 144
144
A
3600 3609Right-handed 310
Helix 145
145
A
3611 3617Right-handed alpha
Helix 146
146
A
3620 3643Right-handed alpha
Helix 147
147
A
3648 3653Right-handed 310
Helix 148
148
A
3659 3670Right-handed alpha
Helix 149
149
A
3712 3729Right-handed alpha
Helix 150
150
A
3735 3745Right-handed alpha
Helix 151
151
A
3747 3754Right-handed alpha
Helix 152
152
A
3757 3775Right-handed 310
Helix 153
153
A
3781 3801Right-handed alpha
Helix 154
154
A
3811 3820Right-handed 310
Helix 155
155
A
3822 3834Right-handed alpha
Helix 156
156
A
3836 3842Right-handed 310
Helix 157
157
A
3858 3871Right-handed alpha
Helix 158
158
A
3879 3896Right-handed alpha
Helix 159
159
A
3907 3940Right-handed alpha
Helix 160
160
A
3942 3958Right-handed 310
Helix 161
161
A
3968 3989Right-handed alpha
Helix 162
162
A
4018 4025Right-handed alpha
Helix 163
163
A
4049 4075Right-handed alpha
Helix 164
164
A
4086 4096Right-handed alpha
Helix 165
165
A
4133 4140Right-handed alpha
Helix 166
166
A
4143 4157Right-handed alpha
Helix 167
167
A
4167 4188Right-handed 310
Helix 168
168
A
4191 4207Right-handed alpha
Helix 169
169
A
4223 4244Right-handed alpha
Helix 170
170
A
4254 4270Right-handed alpha
Helix 171
171
A
4273 4287Right-handed 310
Helix 172
172
A
4289 4296Right-handed alpha
Helix 173
173
A
4303 4305Right-handed 310
Helix 174
174
A
4308 4313Right-handed alpha
Helix 175
175
A
4326 4329Right-handed 310
Helix 176
176
A
4332 4347Right-handed alpha
Helix 177
177
A
4352 4359Right-handed alpha
Helix 178
178
A
4364 4384Right-handed alpha
Helix 179
179
A
4388 4390Right-handed 310
Helix 180
180
A
4394 4406Right-handed alpha
Helix 181
181
A
4413 4424Right-handed alpha
Helix 182
182
A
4441 4456Right-handed alpha
Helix 183
183
A
4463 4470Right-handed alpha
Helix 184
184
A
4472 4475Right-handed 310
Helix 185
185
A
4487 4491Right-handed 310
Helix 186
186
A
4562 4564Right-handed 310
Helix 187
187
A
4576 4596Right-handed alpha
Helix 188
188
A
4598 4604Right-handed alpha
Helix 189
189
A
4612 4631Right-handed alpha
Helix 190
190
A
4635 4651Right-handed alpha
Helix 191
191
A
4671 4704Right-handed alpha
Helix 192
192
A
4713 4718Right-handed alpha
Helix 193
193
A
4722 4724Right-handed 310
Helix 194
194
A
4734 4736Right-handed 310
Helix 195
195
A
4749 4758Right-handed alpha
Helix 196
196
A
4761 4764Right-handed alpha
Helix 197
197
A
4766 4798Right-handed alpha
Helix 198
198
A
4809 4815Right-handed alpha
Helix 199
199
A
4819 4843Right-handed alpha
Helix 200
200
A
4853 4857Right-handed alpha
Helix 201
201
A
4866 4868Right-handed 310
Helix 202
202
A
4875 4902Right-handed 310
Helix 203
203
A
4929 4936Right-handed alpha
Helix 204
204
A
4953 4964Right-handed alpha
Helix 205
205
A
4982 4984Right-handed 310
Helix 206
206
A
4987 4997Right-handed alpha
Helix 207
207
A
5005 5014Right-handed alpha
Helix 208
208
A
5018 5037Right-handed alpha
Helix 209
209
A
5046 5052Right-handed alpha
Helix 210
210
A
5063 5066Right-handed alpha
Helix 211
211
A
5072 5092Right-handed 310
Helix 212
212
A
5103 5105Right-handed 310
Helix 213
213
A
5111 5122Right-handed alpha
Helix 214
214
A
5126 5140Right-handed alpha
Helix 215
215
A
5144 5148Right-handed alpha
Helix 216
216
A
5158 5168Right-handed alpha
Helix 217
217
A
5175 5178Right-handed alpha
Helix 218
218
A
5190 5206Right-handed alpha
Helix 219
219
B
38 51Right-handed alpha
Helix 220
220
B
58 71Right-handed alpha
Helix 221
221
B
228 232Right-handed 310
Helix 222
222
B
248 259Right-handed alpha
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There are 19 sheets in PDB entry 9G08. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 494first strand
Strand 2
A
379 384parallel
Strand 3
A
432 439anti-parallel
Strand 4
A
421 424anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 420first strand
Strand 2
A
399 404anti-parallel
Strand 3
A
448 455anti-parallel
Strand 4
A
478 480anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 455first strand
Strand 2
A
460 462anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
568 570first strand
Strand 2
A
572 574anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1663 1665first strand
Strand 2
A
1651 1654anti-parallel
Strand 3
A
1638 1642anti-parallel
Strand 4
A
1545 1549anti-parallel
Strand 5
A
1563 1567anti-parallel
Strand 6
A
1578 1581anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1831 1835first strand
Strand 2
A
1926 1931parallel
Strand 3
A
1892 1895parallel
Strand 4
A
1862 1864parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2129 2131first strand
Strand 2
A
1986 1991parallel
Strand 3
A
2094 2100parallel
Strand 4
A
2052 2058parallel
Strand 5
A
2019 2025parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2078 2080first strand
Strand 2
A
2086 2088anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2305 2308first strand
Strand 2
A
2315 2318anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2321 2324first strand
Strand 2
A
2330 2333anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2416 2419first strand
Strand 2
A
2518 2524parallel
Strand 3
A
2482 2487parallel
Strand 4
A
2446 2450parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2898 2901first strand
Strand 2
A
2765 2768parallel
Strand 3
A
2880 2885parallel
Strand 4
A
2837 2844parallel
Strand 5
A
2801 2808parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3170 3173first strand
Strand 2
A
3042 3046parallel
Strand 3
A
3148 3153parallel
Strand 4
A
3100 3102parallel
Strand 5
A
3067 3069parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3121 3123first strand
Strand 2
A
3126 3132anti-parallel
Strand 3
A
3137 3142anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3437 3441first strand
Strand 2
A
3313 3320parallel
Strand 3
A
3411 3419parallel
Strand 4
A
3372 3380parallel
Strand 5
A
3345 3348parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3547 3549first strand
Strand 2
A
3693 3695parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4938 4940first strand
Strand 2
A
4948 4950anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 77first strand
Strand 2
B
95 97parallel
Strand 3
B
115 117parallel
Strand 4
B
135 137parallel
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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 157first strand
Strand 2
B
175 177parallel
Strand 3
B
195 197parallel
Strand 4
B
215 217parallel
Strand 5
B
238 240parallel
Strand 6
B
267 269parallel
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