Analysis of interatomic Contacts of Structural Units in PDB entry:
9G09

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G09 entry

There are 2 chains in PDB entry 9G09 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	CYS 37	GLY 273
A	GLY 378	ARG 5207

There are235 helices in PDB entry 9G09. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	37	51	Right-handed alpha
Helix 2	AA2	B	57	72	Right-handed alpha
Helix 3	AA3	B	228	233	Right-handed alpha
Helix 4	AA4	B	247	260	Right-handed alpha
Helix 5	AA5	A	440	444	Right-handed 310
Helix 6	AA6	A	518	541	Right-handed alpha
Helix 7	AA7	A	545	565	Right-handed alpha
Helix 8	AA8	A	583	599	Right-handed alpha
Helix 9	AA9	A	619	633	Right-handed alpha
Helix 10	AB1	A	641	648	Right-handed alpha
Helix 11	AB2	A	654	667	Right-handed alpha
Helix 12	AB3	A	671	686	Right-handed alpha
Helix 13	AB4	A	689	693	Right-handed 310
Helix 14	AB5	A	694	703	Right-handed alpha
Helix 15	AB6	A	710	714	Right-handed 310
Helix 16	AB7	A	715	720	Right-handed alpha
Helix 17	AB8	A	726	734	Right-handed alpha
Helix 18	AB9	A	736	747	Right-handed alpha
Helix 19	AC1	A	749	754	Right-handed alpha
Helix 20	AC2	A	756	765	Right-handed alpha
Helix 21	AC3	A	766	777	Right-handed alpha
Helix 22	AC4	A	777	784	Right-handed alpha
Helix 23	AC5	A	786	808	Right-handed alpha
Helix 24	AC6	A	810	831	Right-handed alpha
Helix 25	AC7	A	842	859	Right-handed alpha
Helix 26	AC8	A	861	864	Right-handed 310
Helix 27	AC9	A	865	881	Right-handed alpha
Helix 28	AD1	A	899	918	Right-handed alpha
Helix 29	AD2	A	934	944	Right-handed alpha
Helix 30	AD3	A	948	951	Right-handed 310
Helix 31	AD4	A	952	967	Right-handed alpha
Helix 32	AD5	A	969	980	Right-handed alpha
Helix 33	AD6	A	982	986	Right-handed 310
Helix 34	AD7	A	989	1010	Right-handed alpha
Helix 35	AD8	A	1021	1037	Right-handed alpha
Helix 36	AD9	A	1043	1054	Right-handed alpha
Helix 37	AE1	A	1055	1067	Right-handed alpha
Helix 38	AE2	A	1068	1074	Right-handed alpha
Helix 39	AE3	A	1075	1099	Right-handed alpha
Helix 40	AE4	A	1102	1112	Right-handed alpha
Helix 41	AE5	A	1112	1127	Right-handed alpha
Helix 42	AE6	A	1135	1167	Right-handed alpha
Helix 43	AE7	A	1168	1170	Right-handed 310
Helix 44	AE8	A	1175	1184	Right-handed alpha
Helix 45	AE9	A	1185	1189	Right-handed 310
Helix 46	AF1	A	1190	1195	Right-handed alpha
Helix 47	AF2	A	1214	1227	Right-handed alpha
Helix 48	AF3	A	1230	1235	Right-handed alpha
Helix 49	AF4	A	1270	1278	Right-handed alpha
Helix 50	AF5	A	1278	1296	Right-handed alpha
Helix 51	AF6	A	1299	1307	Right-handed alpha
Helix 52	AF7	A	1313	1326	Right-handed alpha
Helix 53	AF8	A	1335	1367	Right-handed alpha
Helix 54	AF9	A	1372	1374	Right-handed 310
Helix 55	AG1	A	1375	1384	Right-handed alpha
Helix 56	AG2	A	1384	1389	Right-handed alpha
Helix 57	AG3	A	1398	1407	Right-handed alpha
Helix 58	AG4	A	1411	1423	Right-handed alpha
Helix 59	AG5	A	1424	1435	Right-handed alpha
Helix 60	AG6	A	1437	1452	Right-handed alpha
Helix 61	AG7	A	1455	1472	Right-handed alpha
Helix 62	AG8	A	1472	1477	Right-handed alpha
Helix 63	AG9	A	1484	1502	Right-handed alpha
Helix 64	AH1	A	1504	1515	Right-handed alpha
Helix 65	AH2	A	1515	1525	Right-handed alpha
Helix 66	AH3	A	1532	1543	Right-handed alpha
Helix 67	AH4	A	1558	1562	Right-handed alpha
Helix 68	AH5	A	1582	1596	Right-handed alpha
Helix 69	AH6	A	1602	1630	Right-handed alpha
Helix 70	AH7	A	1632	1636	Right-handed 310
Helix 71	AH8	A	1668	1698	Right-handed alpha
Helix 72	AH9	A	1699	1704	Right-handed 310
Helix 73	AI1	A	1705	1717	Right-handed alpha
Helix 74	AI2	A	1722	1731	Right-handed alpha
Helix 75	AI3	A	1737	1746	Right-handed alpha
Helix 76	AI4	A	1750	1771	Right-handed alpha
Helix 77	AI5	A	1773	1788	Right-handed alpha
Helix 78	AI6	A	1798	1813	Right-handed alpha
Helix 79	AI7	A	1836	1850	Right-handed alpha
Helix 80	AI8	A	1870	1883	Right-handed alpha
Helix 81	AI9	A	1896	1900	Right-handed 310
Helix 82	AJ1	A	1901	1918	Right-handed alpha
Helix 83	AJ2	A	1933	1935	Right-handed 310
Helix 84	AJ3	A	1937	1943	Right-handed alpha
Helix 85	AJ4	A	1944	1947	Right-handed 310
Helix 86	AJ5	A	1955	1968	Right-handed alpha
Helix 87	AJ6	A	1975	1980	Right-handed 310
Helix 88	AJ7	A	1997	2013	Right-handed alpha
Helix 89	AJ8	A	2031	2040	Right-handed alpha
Helix 90	AJ9	A	2041	2050	Right-handed 310
Helix 91	AK1	A	2065	2075	Right-handed alpha
Helix 92	AK2	A	2122	2127	Right-handed 310
Helix 93	AK3	A	2134	2142	Right-handed alpha
Helix 94	AK4	A	2155	2160	Right-handed alpha
Helix 95	AK5	A	2161	2176	Right-handed alpha
Helix 96	AK6	A	2193	2206	Right-handed alpha
Helix 97	AK7	A	2211	2232	Right-handed alpha
Helix 98	AK8	A	2246	2264	Right-handed alpha
Helix 99	AK9	A	2348	2357	Right-handed alpha
Helix 100	AL1	A	2364	2368	Right-handed 310
Helix 101	AL2	A	2369	2382	Right-handed alpha
Helix 102	AL3	A	2396	2413	Right-handed alpha
Helix 103	AL4	A	2425	2439	Right-handed alpha
Helix 104	AL5	A	2456	2478	Right-handed alpha
Helix 105	AL6	A	2488	2493	Right-handed 310
Helix 106	AL7	A	2494	2503	Right-handed alpha
Helix 107	AL8	A	2531	2541	Right-handed alpha
Helix 108	AL9	A	2562	2564	Right-handed 310
Helix 109	AM1	A	2586	2606	Right-handed alpha
Helix 110	AM2	A	2608	2629	Right-handed alpha
Helix 111	AM3	A	2638	2669	Right-handed alpha
Helix 112	AM4	A	2679	2693	Right-handed alpha
Helix 113	AM5	A	2699	2709	Right-handed alpha
Helix 114	AM6	A	2717	2734	Right-handed alpha
Helix 115	AM7	A	2745	2762	Right-handed alpha
Helix 116	AM8	A	2774	2786	Right-handed alpha
Helix 117	AM9	A	2793	2799	Right-handed alpha
Helix 118	AN1	A	2814	2830	Right-handed alpha
Helix 119	AN2	A	2846	2850	Right-handed 310
Helix 120	AN3	A	2855	2858	Right-handed 310
Helix 121	AN4	A	2859	2866	Right-handed alpha
Helix 122	AN5	A	2874	2878	Right-handed 310
Helix 123	AN6	A	2890	2895	Right-handed 310
Helix 124	AN7	A	2906	2919	Right-handed alpha
Helix 125	AN8	A	2922	2946	Right-handed alpha
Helix 126	AN9	A	2952	2971	Right-handed alpha
Helix 127	AO1	A	2975	2988	Right-handed alpha
Helix 128	AO2	A	2994	3002	Right-handed alpha
Helix 129	AO3	A	3003	3008	Right-handed 310
Helix 130	AO4	A	3013	3023	Right-handed alpha
Helix 131	AO5	A	3050	3059	Right-handed alpha
Helix 132	AO6	A	3079	3097	Right-handed alpha
Helix 133	AO7	A	3105	3107	Right-handed 310
Helix 134	AO8	A	3108	3118	Right-handed alpha
Helix 135	AO9	A	3154	3160	Right-handed alpha
Helix 136	AP1	A	3162	3169	Right-handed alpha
Helix 137	AP2	A	3175	3180	Right-handed alpha
Helix 138	AP3	A	3181	3201	Right-handed alpha
Helix 139	AP4	A	3213	3218	Right-handed alpha
Helix 140	AP5	A	3224	3238	Right-handed alpha
Helix 141	AP6	A	3243	3261	Right-handed alpha
Helix 142	AP7	A	3263	3274	Right-handed alpha
Helix 143	AP8	A	3277	3289	Right-handed alpha
Helix 144	AP9	A	3295	3307	Right-handed alpha
Helix 145	AQ1	A	3326	3338	Right-handed alpha
Helix 146	AQ2	A	3350	3352	Right-handed 310
Helix 147	AQ3	A	3354	3367	Right-handed alpha
Helix 148	AQ4	A	3387	3405	Right-handed alpha
Helix 149	AQ5	A	3457	3461	Right-handed 310
Helix 150	AQ6	A	3462	3467	Right-handed alpha
Helix 151	AQ7	A	3531	3546	Right-handed alpha
Helix 152	AQ8	A	3555	3568	Right-handed alpha
Helix 153	AQ9	A	3572	3595	Right-handed alpha
Helix 154	AR1	A	3599	3601	Right-handed 310
Helix 155	AR2	A	3602	3609	Right-handed alpha
Helix 156	AR3	A	3610	3618	Right-handed alpha
Helix 157	AR4	A	3619	3644	Right-handed alpha
Helix 158	AR5	A	3648	3654	Right-handed alpha
Helix 159	AR6	A	3658	3671	Right-handed alpha
Helix 160	AR7	A	3711	3730	Right-handed alpha
Helix 161	AR8	A	3734	3746	Right-handed alpha
Helix 162	AR9	A	3746	3755	Right-handed alpha
Helix 163	AS1	A	3757	3776	Right-handed alpha
Helix 164	AS2	A	3780	3801	Right-handed alpha
Helix 165	AS3	A	3811	3821	Right-handed alpha
Helix 166	AS4	A	3821	3835	Right-handed alpha
Helix 167	AS5	A	3837	3843	Right-handed alpha
Helix 168	AS6	A	3857	3872	Right-handed alpha
Helix 169	AS7	A	3878	3897	Right-handed alpha
Helix 170	AS8	A	3906	3941	Right-handed alpha
Helix 171	AS9	A	3944	3960	Right-handed alpha
Helix 172	AT1	A	3967	3990	Right-handed alpha
Helix 173	AT2	A	4018	4025	Right-handed alpha
Helix 174	AT3	A	4048	4076	Right-handed alpha
Helix 175	AT4	A	4085	4096	Right-handed alpha
Helix 176	AT5	A	4132	4140	Right-handed alpha
Helix 177	AT6	A	4142	4158	Right-handed alpha
Helix 178	AT7	A	4167	4187	Right-handed alpha
Helix 179	AT8	A	4190	4208	Right-handed alpha
Helix 180	AT9	A	4222	4245	Right-handed alpha
Helix 181	AU1	A	4253	4271	Right-handed alpha
Helix 182	AU2	A	4273	4287	Right-handed alpha
Helix 183	AU3	A	4288	4297	Right-handed alpha
Helix 184	AU4	A	4302	4306	Right-handed 310
Helix 185	AU5	A	4307	4314	Right-handed alpha
Helix 186	AU6	A	4325	4330	Right-handed 310
Helix 187	AU7	A	4331	4348	Right-handed alpha
Helix 188	AU8	A	4351	4360	Right-handed alpha
Helix 189	AU9	A	4363	4384	Right-handed alpha
Helix 190	AV1	A	4387	4391	Right-handed 310
Helix 191	AV2	A	4393	4407	Right-handed alpha
Helix 192	AV3	A	4412	4424	Right-handed alpha
Helix 193	AV4	A	4441	4457	Right-handed alpha
Helix 194	AV5	A	4459	4461	Right-handed 310
Helix 195	AV6	A	4462	4471	Right-handed alpha
Helix 196	AV7	A	4472	4478	Right-handed 310
Helix 197	AV8	A	4486	4492	Right-handed alpha
Helix 198	AV9	A	4561	4565	Right-handed 310
Helix 199	AW1	A	4575	4597	Right-handed alpha
Helix 200	AW2	A	4597	4605	Right-handed alpha
Helix 201	AW3	A	4611	4632	Right-handed alpha
Helix 202	AW4	A	4634	4652	Right-handed alpha
Helix 203	AW5	A	4670	4690	Right-handed alpha
Helix 204	AW6	A	4691	4705	Right-handed alpha
Helix 205	AW7	A	4706	4711	Right-handed alpha
Helix 206	AW8	A	4712	4720	Right-handed alpha
Helix 207	AW9	A	4721	4725	Right-handed 310
Helix 208	AX1	A	4733	4737	Right-handed 310
Helix 209	AX2	A	4748	4759	Right-handed alpha
Helix 210	AX3	A	4760	4765	Right-handed alpha
Helix 211	AX4	A	4765	4779	Right-handed alpha
Helix 212	AX5	A	4780	4782	Right-handed 310
Helix 213	AX6	A	4783	4799	Right-handed alpha
Helix 214	AX7	A	4808	4816	Right-handed alpha
Helix 215	AX8	A	4818	4844	Right-handed alpha
Helix 216	AX9	A	4852	4858	Right-handed alpha
Helix 217	AY1	A	4865	4870	Right-handed 310
Helix 218	AY2	A	4876	4903	Right-handed alpha
Helix 219	AY3	A	4928	4936	Right-handed alpha
Helix 220	AY4	A	4952	4965	Right-handed alpha
Helix 221	AY5	A	4981	4985	Right-handed 310
Helix 222	AY6	A	4986	4998	Right-handed alpha
Helix 223	AY7	A	5004	5015	Right-handed alpha
Helix 224	AY8	A	5017	5038	Right-handed alpha
Helix 225	AY9	A	5045	5053	Right-handed alpha
Helix 226	AZ1	A	5062	5068	Right-handed alpha
Helix 227	AZ2	A	5071	5073	Right-handed 310
Helix 228	AZ3	A	5074	5093	Right-handed alpha
Helix 229	AZ4	A	5102	5106	Right-handed 310
Helix 230	AZ5	A	5110	5123	Right-handed alpha
Helix 231	AZ6	A	5125	5143	Right-handed alpha
Helix 232	AZ7	A	5143	5149	Right-handed alpha
Helix 233	AZ8	A	5157	5169	Right-handed alpha
Helix 234	AZ9	A	5174	5180	Right-handed alpha
Helix 235	BA1	A	5189	5207	Right-handed alpha

There are 22 sheets in PDB entry 9G09. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	97	first strand
Strand 2	B	115	117	parallel
Strand 3	B	135	137	parallel
Strand 4	B	155	157	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	177	first strand
Strand 2	B	195	197	parallel
Strand 3	B	215	217	parallel
Strand 4	B	238	240	parallel
Strand 5	B	267	269	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	462	first strand
Strand 2	A	447	455	anti-parallel
Strand 3	A	399	404	anti-parallel
Strand 4	A	418	422	anti-parallel
Strand 5	A	431	439	anti-parallel
Strand 6	A	379	387	anti-parallel
Strand 7	A	491	499	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	462	first strand
Strand 2	A	447	455	anti-parallel
Strand 3	A	477	481	anti-parallel
Strand 4	A	567	569	anti-parallel
Strand 5	A	573	575	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1578	1581	first strand
Strand 2	A	1563	1567	anti-parallel
Strand 3	A	1545	1548	anti-parallel
Strand 4	A	1638	1646	anti-parallel
Strand 5	A	1649	1654	anti-parallel
Strand 6	A	1663	1665	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1830	1835	first strand
Strand 2	A	1926	1931	parallel
Strand 3	A	1892	1895	parallel
Strand 4	A	1862	1864	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2020	2025	first strand
Strand 2	A	2052	2058	parallel
Strand 3	A	2093	2100	parallel
Strand 4	A	1986	1991	parallel
Strand 5	A	2129	2131	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2078	2080	first strand
Strand 2	A	2086	2088	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2305	2308	first strand
Strand 2	A	2315	2318	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2321	2324	first strand
Strand 2	A	2329	2333	anti-parallel
Strand 3	A	2340	2347	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2446	2450	first strand
Strand 2	A	2482	2487	parallel
Strand 3	A	2518	2524	parallel
Strand 4	A	2416	2419	parallel
Strand 5	A	2580	2581	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2506	2507	first strand
Strand 2	A	2510	2511	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2555	2556	first strand
Strand 2	A	2559	2560	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2801	2808	first strand
Strand 2	A	2837	2844	parallel
Strand 3	A	2880	2885	parallel
Strand 4	A	2765	2768	parallel
Strand 5	A	2898	2901	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3067	3069	first strand
Strand 2	A	3100	3102	parallel
Strand 3	A	3148	3153	parallel
Strand 4	A	3042	3046	parallel
Strand 5	A	3170	3173	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3121	3123	first strand
Strand 2	A	3126	3133	anti-parallel
Strand 3	A	3136	3142	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3345	3348	first strand
Strand 2	A	3372	3380	parallel
Strand 3	A	3411	3419	parallel
Strand 4	A	3313	3320	parallel
Strand 5	A	3439	3441	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3547	3549	first strand
Strand 2	A	3693	3695	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4007	4008	first strand
Strand 2	A	4016	4017	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4097	4098	first strand
Strand 2	A	4113	4114	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4130	4131	first strand
Strand 2	A	4937	4942	anti-parallel
Strand 3	A	4945	4951	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4503	4504	first strand
Strand 2	A	4510	4511	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G09

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G09