Analysis of interatomic Contacts of Structural Units in PDB entry:
9G0B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G0B entry

There are 4 chains in PDB entry 9G0B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1ALA 280
B
 ASP 1GLN 251
C
 GLY 1GLN 237
D
 LEU 1LYS 34
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9G0B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 8Right-handed alpha
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
43 47Right-handed 310
Helix 4
AA4
A
63 69Right-handed alpha
Helix 5
AA5
A
101 109Right-handed alpha
Helix 6
AA6
A
155 160Right-handed 310
Helix 7
AA7
B
25 27Right-handed 310
Helix 8
AA8
B
46 50Right-handed 310
Helix 9
AA9
B
80 89Right-handed alpha
Helix 10
AB1
B
134 138Right-handed 310
Helix 11
AB2
B
161 165Right-handed 310
Helix 12
AB3
B
173 177Right-handed 310
Helix 13
AB4
C
43 48Right-handed alpha
Helix 14
AB5
C
65 69Right-handed 310
Helix 15
AB6
C
93 96Right-handed 310
Helix 16
AB7
C
97 104Right-handed alpha
Helix 17
AB8
C
143 149Right-handed alpha
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There are 11 sheets in PDB entry 9G0B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
C
162 167anti-parallel
Strand 3
C
113 120anti-parallel
Strand 4
C
205 214anti-parallel
Strand 5
C
51 52anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
C
162 167anti-parallel
Strand 3
C
113 120anti-parallel
Strand 4
C
205 214anti-parallel
Strand 5
C
70 73anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 80first strand
Strand 2
A
226 242anti-parallel
Strand 3
A
113 128anti-parallel
Strand 4
A
176 179anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 80first strand
Strand 2
A
226 242anti-parallel
Strand 3
A
113 128anti-parallel
Strand 4
A
188 189anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
212 217anti-parallel
Strand 3
A
137 143anti-parallel
Strand 4
A
165 169anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
12 15anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
189 194parallel
Strand 3
B
91 101anti-parallel
Strand 4
B
230 244anti-parallel
Strand 5
B
54 55anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
189 194parallel
Strand 3
B
91 101anti-parallel
Strand 4
B
230 244anti-parallel
Strand 5
B
59 61anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
68 72anti-parallel
Strand 3
B
211 223anti-parallel
Strand 4
B
108 118anti-parallel
Strand 5
B
179 183anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 86first strand
Strand 2
C
187 197anti-parallel
Strand 3
C
126 134anti-parallel
Strand 4
C
151 156anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
106 110anti-parallel
Strand 3
C
219 223anti-parallel
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