Analysis of interatomic Contacts of Structural Units in PDB entry:
9G0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G0K entry

There are 2 chains in PDB entry 9G0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 17SER 229
B
 THR 17SER 229
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 9G0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 26Right-handed alpha
Helix 2
AA2
A
28 42Right-handed alpha
Helix 3
AA3
A
58 68Right-handed alpha
Helix 4
AA4
A
79 90Right-handed alpha
Helix 5
AA5
A
120 124Right-handed 310
Helix 6
AA6
A
125 139Right-handed alpha
Helix 7
AA7
A
156 174Right-handed alpha
Helix 8
AA8
A
177 188Right-handed alpha
Helix 9
AA9
A
195 207Right-handed alpha
Helix 10
AB1
B
18 26Right-handed alpha
Helix 11
AB2
B
28 42Right-handed alpha
Helix 12
AB3
B
58 68Right-handed alpha
Helix 13
AB4
B
79 90Right-handed alpha
Helix 14
AB5
B
120 124Right-handed 310
Helix 15
AB6
B
125 139Right-handed alpha
Helix 16
AB7
B
156 174Right-handed alpha
Helix 17
AB8
B
177 188Right-handed alpha
Helix 18
AB9
B
189 191Right-handed 310
Helix 19
AC1
B
195 206Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 9G0K.

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
72 77parallel
Strand 3
A
49 53parallel
Strand 4
A
112 118parallel
Strand 5
A
140 151parallel
Strand 6
A
220 226anti-parallel
Strand 7
A
210 217anti-parallel
Strand 8
B
210 217anti-parallel
Strand 9
B
220 226anti-parallel
Strand 10
B
140 151anti-parallel
Strand 11
B
112 118parallel
Strand 12
B
49 53parallel
Strand 13
B
72 77parallel
Strand 14
B
96 100parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il