Analysis of interatomic Contacts of Structural Units in PDB entry:
9G2C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G2C entry

There are 17 chains in PDB entry 9G2C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 128	ALA 1658
B	ALA 11	LYS 1203
C	GLU 30	ILE 333
E	ASP 2	ARG 192
F	GLY 52	ASP 154
G	VAL 47	LEU 122
H	ASN 3	ARG 146
I	VAL 4	LYS 63
J	ILE 2	ARG 69
K	GLU 45	SER 141
L	LEU 27	ARG 70
M	SER 14	SER 115
N	SER 24	TYR 175
R	A 4	G 12
S	T 4	G 38
T	C 1	T 16
T	C 18	A 35

There are126 helices in PDB entry 9G2C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	134	138	Right-handed 310
Helix 2	AA2	A	186	198	Right-handed alpha
Helix 3	AA3	A	316	331	Right-handed alpha
Helix 4	AA4	A	381	406	Right-handed alpha
Helix 5	AA5	A	407	409	Right-handed 310
Helix 6	AA6	A	415	434	Right-handed alpha
Helix 7	AA7	A	466	471	Right-handed alpha
Helix 8	AA8	A	498	505	Right-handed alpha
Helix 9	AA9	A	515	521	Right-handed alpha
Helix 10	AB1	A	521	526	Right-handed alpha
Helix 11	AB2	A	550	555	Right-handed alpha
Helix 12	AB3	A	596	598	Right-handed 310
Helix 13	AB4	A	617	619	Right-handed 310
Helix 14	AB5	A	620	625	Right-handed alpha
Helix 15	AB6	A	640	650	Right-handed alpha
Helix 16	AB7	A	653	657	Right-handed 310
Helix 17	AB8	A	671	682	Right-handed alpha
Helix 18	AB9	A	688	701	Right-handed alpha
Helix 19	AC1	A	702	705	Right-handed 310
Helix 20	AC2	A	727	740	Right-handed alpha
Helix 21	AC3	A	756	761	Right-handed 310
Helix 22	AC4	A	792	824	Right-handed alpha
Helix 23	AC5	A	829	834	Right-handed alpha
Helix 24	AC6	A	836	848	Right-handed alpha
Helix 25	AC7	A	849	851	Right-handed 310
Helix 26	AC8	A	852	862	Right-handed alpha
Helix 27	AC9	A	872	885	Right-handed alpha
Helix 28	AD1	A	885	912	Right-handed alpha
Helix 29	AD2	A	923	931	Right-handed alpha
Helix 30	AD3	A	936	945	Right-handed alpha
Helix 31	AD4	A	991	1013	Right-handed alpha
Helix 32	AD5	A	1017	1027	Right-handed alpha
Helix 33	AD6	A	1065	1071	Right-handed alpha
Helix 34	AD7	A	1072	1080	Right-handed alpha
Helix 35	AD8	A	1091	1108	Right-handed alpha
Helix 36	AD9	A	1122	1127	Right-handed alpha
Helix 37	AE1	A	1137	1149	Right-handed alpha
Helix 38	AE2	A	1162	1177	Right-handed alpha
Helix 39	AE3	A	1186	1195	Right-handed alpha
Helix 40	AE4	A	1196	1198	Right-handed 310
Helix 41	AE5	A	1217	1227	Right-handed alpha
Helix 42	AE6	A	1252	1259	Right-handed alpha
Helix 43	AE7	A	1262	1265	Right-handed 310
Helix 44	AE8	A	1298	1306	Right-handed alpha
Helix 45	AE9	A	1309	1320	Right-handed alpha
Helix 46	AF1	A	1320	1337	Right-handed alpha
Helix 47	AF2	A	1441	1453	Right-handed alpha
Helix 48	AF3	A	1486	1496	Right-handed alpha
Helix 49	AF4	A	1548	1553	Right-handed alpha
Helix 50	AF5	A	1557	1571	Right-handed alpha
Helix 51	AF6	A	1578	1585	Right-handed alpha
Helix 52	AF7	A	1599	1604	Right-handed alpha
Helix 53	AF8	A	1608	1615	Right-handed alpha
Helix 54	AF9	A	1617	1625	Right-handed alpha
Helix 55	AG1	A	1639	1644	Right-handed alpha
Helix 56	AG2	A	1649	1653	Right-handed 310
Helix 57	AG3	B	17	27	Right-handed alpha
Helix 58	AG4	B	35	52	Right-handed alpha
Helix 59	AG5	B	60	67	Right-handed alpha
Helix 60	AG6	B	176	183	Right-handed alpha
Helix 61	AG7	B	219	225	Right-handed alpha
Helix 62	AG8	B	273	281	Right-handed alpha
Helix 63	AG9	B	284	293	Right-handed alpha
Helix 64	AH1	B	300	317	Right-handed alpha
Helix 65	AH2	B	322	334	Right-handed alpha
Helix 66	AH3	B	345	357	Right-handed alpha
Helix 67	AH4	B	359	363	Right-handed 310
Helix 68	AH5	B	366	386	Right-handed alpha
Helix 69	AH6	B	404	434	Right-handed alpha
Helix 70	AH7	B	442	452	Right-handed alpha
Helix 71	AH8	B	456	468	Right-handed alpha
Helix 72	AH9	B	492	500	Right-handed alpha
Helix 73	AI1	B	506	512	Right-handed alpha
Helix 74	AI2	B	515	519	Right-handed 310
Helix 75	AI3	B	521	525	Right-handed 310
Helix 76	AI4	B	560	568	Right-handed alpha
Helix 77	AI5	B	597	615	Right-handed alpha
Helix 78	AI6	B	665	670	Right-handed alpha
Helix 79	AI7	B	677	681	Right-handed 310
Helix 80	AI8	B	692	696	Right-handed 310
Helix 81	AI9	B	698	703	Right-handed alpha
Helix 82	AJ1	B	706	710	Right-handed 310
Helix 83	AJ2	B	711	723	Right-handed alpha
Helix 84	AJ3	B	732	736	Right-handed 310
Helix 85	AJ4	B	761	765	Right-handed 310
Helix 86	AJ5	B	791	796	Right-handed alpha
Helix 87	AJ6	B	835	839	Right-handed 310
Helix 88	AJ7	B	952	958	Right-handed alpha
Helix 89	AJ8	B	959	976	Right-handed alpha
Helix 90	AJ9	B	987	990	Right-handed 310
Helix 91	AK1	B	991	1004	Right-handed alpha
Helix 92	AK2	B	1072	1082	Right-handed alpha
Helix 93	AK3	B	1084	1092	Right-handed alpha
Helix 94	AK4	B	1180	1193	Right-handed alpha
Helix 95	AK5	C	32	40	Right-handed alpha
Helix 96	AK6	C	60	73	Right-handed alpha
Helix 97	AK7	C	93	103	Right-handed alpha
Helix 98	AK8	C	121	126	Right-handed alpha
Helix 99	AK9	C	152	156	Right-handed alpha
Helix 100	AL1	C	165	167	Right-handed 310
Helix 101	AL2	C	174	179	Right-handed alpha
Helix 102	AL3	C	216	220	Right-handed 310
Helix 103	AL4	C	241	251	Right-handed alpha
Helix 104	AL5	C	277	282	Right-handed alpha
Helix 105	AL6	C	309	331	Right-handed alpha
Helix 106	AL7	E	5	27	Right-handed alpha
Helix 107	AL8	E	31	37	Right-handed alpha
Helix 108	AL9	E	38	46	Right-handed alpha
Helix 109	AM1	E	67	71	Right-handed 310
Helix 110	AM2	E	117	122	Right-handed alpha
Helix 111	AM3	E	161	169	Right-handed alpha
Helix 112	AM4	E	171	175	Right-handed 310
Helix 113	AM5	E	182	188	Right-handed alpha
Helix 114	AM6	F	55	61	Right-handed alpha
Helix 115	AM7	F	65	72	Right-handed alpha
Helix 116	AM8	F	86	103	Right-handed alpha
Helix 117	AM9	F	116	128	Right-handed alpha
Helix 118	AN1	H	88	93	Right-handed alpha
Helix 119	AN2	H	128	133	Right-handed alpha
Helix 120	AN3	J	16	27	Right-handed alpha
Helix 121	AN4	J	31	40	Right-handed alpha
Helix 122	AN5	J	43	52	Right-handed alpha
Helix 123	AN6	J	57	62	Right-handed alpha
Helix 124	AN7	K	69	83	Right-handed alpha
Helix 125	AN8	K	112	141	Right-handed alpha
Helix 126	AN9	N	149	154	Right-handed alpha

There are 32 sheets in PDB entry 9G2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	494	497	first strand
Strand 2	A	600	607	parallel
Strand 3	A	586	590	anti-parallel
Strand 4	A	633	636	anti-parallel
Strand 5	A	479	482	anti-parallel
Strand 6	B	1045	1047	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	510	first strand
Strand 2	A	576	580	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	752	first strand
Strand 2	A	768	771	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	948	949	first strand
Strand 2	A	981	982	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1031	1032	first strand
Strand 2	A	1038	1039	anti-parallel
Strand 3	A	1045	1047	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1267	1269	first strand
Strand 2	A	1295	1296	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1272	1275	first strand
Strand 2	I	46	49	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1458	1459	first strand
Strand 2	A	1472	1473	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1655	1657	first strand
Strand 2	F	133	135	anti-parallel
Strand 3	F	145	147	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	102	first strand
Strand 2	B	139	143	anti-parallel
Strand 3	B	154	155	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	203	first strand
Strand 2	B	485	486	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	403	first strand
Strand 2	B	205	209	anti-parallel
Strand 3	B	502	504	parallel
Strand 4	B	543	544	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	215	216	first strand
Strand 2	B	229	239	anti-parallel
Strand 3	B	245	253	anti-parallel
Strand 4	B	258	264	anti-parallel
Strand 5	B	267	272	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	551	first strand
Strand 2	B	649	655	anti-parallel
Strand 3	B	661	664	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	551	first strand
Strand 2	B	649	655	anti-parallel
Strand 3	B	688	689	anti-parallel
Strand 4	B	674	675	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	591	596	first strand
Strand 2	B	584	588	anti-parallel
Strand 3	B	639	643	parallel
Strand 4	B	625	629	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1010	1011	first strand
Strand 2	B	1026	1035	anti-parallel
Strand 3	B	916	919	anti-parallel
Strand 4	B	925	931	anti-parallel
Strand 5	B	787	790	parallel
Strand 6	B	947	949	anti-parallel
Strand 7	B	769	775	parallel
Strand 8	B	1026	1035	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	810	first strand
Strand 2	B	900	908	anti-parallel
Strand 3	B	880	888	anti-parallel
Strand 4	B	851	852	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	810	first strand
Strand 2	B	900	908	anti-parallel
Strand 3	B	880	888	anti-parallel
Strand 4	L	55	57	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	823	825	first strand
Strand 2	B	859	863	anti-parallel
Strand 3	B	868	872	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	938	939	first strand
Strand 2	B	1013	1014	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	43	first strand
Strand 2	C	55	57	anti-parallel
Strand 3	C	289	300	anti-parallel
Strand 4	C	227	235	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	135	first strand
Strand 2	C	200	211	anti-parallel
Strand 3	C	138	142	anti-parallel
Strand 4	C	157	158	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	135	first strand
Strand 2	C	200	211	anti-parallel
Strand 3	C	77	88	anti-parallel
Strand 4	L	65	66	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	192	195	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	259	first strand
Strand 2	C	264	267	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	62	first strand
Strand 2	E	80	81	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	12	first strand
Strand 2	H	53	60	anti-parallel
Strand 3	H	141	145	anti-parallel
Strand 4	H	95	97	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	16	first strand
Strand 2	H	23	29	anti-parallel
Strand 3	H	37	43	anti-parallel
Strand 4	H	121	127	anti-parallel
Strand 5	H	111	118	anti-parallel
Strand 6	H	100	108	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	47	49	first strand
Strand 2	K	60	66	anti-parallel
Strand 3	K	100	107	anti-parallel
Strand 4	K	86	92	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	15	16	first strand
Strand 2	M	90	91	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	78	79	first strand
Strand 2	N	52	53	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G2C

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G2C