Analysis of interatomic Contacts of Structural Units in PDB entry:
9G2T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G2T entry

There are 2 chains in PDB entry 9G2T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 316TYR 890
B
 ILE 2GLN 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 9G2T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
316 323Right-handed alpha
Helix 2
AA2
A
326 361Right-handed alpha
Helix 3
AA3
A
363 412Right-handed alpha
Helix 4
AA4
A
416 421Right-handed alpha
Helix 5
AA5
A
422 432Right-handed alpha
Helix 6
AA6
A
432 438Right-handed alpha
Helix 7
AA7
A
438 444Right-handed alpha
Helix 8
AA8
A
444 467Right-handed alpha
Helix 9
AA9
A
467 516Right-handed alpha
Helix 10
AB1
A
516 523Right-handed alpha
Helix 11
AB2
A
529 560Right-handed alpha
Helix 12
AB3
A
561 579Right-handed alpha
Helix 13
AB4
A
583 586Right-handed 310
Helix 14
AB5
A
587 594Right-handed alpha
Helix 15
AB6
A
597 606Right-handed alpha
Helix 16
AB7
A
607 626Right-handed alpha
Helix 17
AB8
A
692 702Right-handed alpha
Helix 18
AB9
A
722 728Right-handed alpha
Helix 19
AC1
A
743 749Right-handed alpha
Helix 20
AC2
A
756 767Right-handed alpha
Helix 21
AC3
A
769 776Right-handed alpha
Helix 22
AC4
A
778 782Right-handed 310
Helix 23
AC5
A
791 807Right-handed alpha
Helix 24
AC6
A
821 836Right-handed alpha
Helix 25
AC7
A
847 851Right-handed 310
Helix 26
AC8
A
870 878Right-handed alpha
Helix 27
AC9
A
879 890Right-handed alpha
Helix 28
AD1
B
3 8Right-handed alpha
Helix 29
AD2
B
13 37Right-handed alpha
Helix 30
AD3
B
37 46Right-handed alpha
Helix 31
AD4
B
49 51Right-handed 310
Helix 32
AD5
B
52 97Right-handed alpha
Helix 33
AD6
B
98 100Right-handed 310
Helix 34
AD7
B
101 105Right-handed 310
Helix 35
AD8
B
106 119Right-handed alpha
Helix 36
AD9
B
121 126Right-handed alpha
Helix 37
AE1
B
131 149Right-handed alpha
Helix 38
AE2
B
150 152Right-handed 310
Helix 39
AE3
B
153 202Right-handed alpha
Helix 40
AE4
B
202 209Right-handed alpha
Helix 41
AE5
B
217 265Right-handed alpha
Helix 42
AE6
B
269 280Right-handed alpha
Helix 43
AE7
B
280 291Right-handed alpha
Helix 44
AE8
B
292 312Right-handed alpha
Helix 45
AE9
B
369 378Right-handed alpha
Helix 46
AF1
B
396 398Right-handed 310
Helix 47
AF2
B
399 405Right-handed alpha
Helix 48
AF3
B
420 427Right-handed alpha
Helix 49
AF4
B
433 444Right-handed alpha
Helix 50
AF5
B
446 453Right-handed alpha
Helix 51
AF6
B
469 484Right-handed alpha
Helix 52
AF7
B
499 512Right-handed alpha
Helix 53
AF8
B
525 530Right-handed 310
Helix 54
AF9
B
548 556Right-handed alpha
Helix 55
AG1
B
557 563Right-handed alpha
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There are 4 sheets in PDB entry 9G2T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 677first strand
Strand 2
A
654 662anti-parallel
Strand 3
A
708 713anti-parallel
Strand 4
A
716 717anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 733first strand
Strand 2
A
810 814parallel
Strand 3
A
840 844parallel
Strand 4
A
682 686parallel
Strand 5
A
856 861parallel
Strand 6
A
864 869anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 350first strand
Strand 2
B
332 341anti-parallel
Strand 3
B
385 390anti-parallel
Strand 4
B
393 394anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
408 410first strand
Strand 2
B
488 492parallel
Strand 3
B
518 522parallel
Strand 4
B
359 363parallel
Strand 5
B
534 538parallel
Strand 6
B
543 547anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il