Analysis of interatomic Contacts of Structural Units in PDB entry:
9G3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G3F entry

There are 2 chains in PDB entry 9G3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 2ASP 394
B
 PHE 2LEU 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9G3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 29Right-handed alpha
Helix 2
AA2
A
31 38Right-handed alpha
Helix 3
AA3
A
48 53Right-handed 310
Helix 4
AA4
A
54 78Right-handed alpha
Helix 5
AA5
A
83 88Right-handed alpha
Helix 6
AA6
A
88 125Right-handed alpha
Helix 7
AA7
A
130 175Right-handed alpha
Helix 8
AA8
A
177 182Right-handed alpha
Helix 9
AA9
A
186 193Right-handed alpha
Helix 10
AB1
A
193 227Right-handed alpha
Helix 11
AB2
A
228 230Right-handed 310
Helix 12
AB3
A
241 253Right-handed alpha
Helix 13
AB4
A
256 262Right-handed alpha
Helix 14
AB5
A
263 289Right-handed alpha
Helix 15
AB6
A
294 337Right-handed alpha
Helix 16
AB7
A
338 344Right-handed alpha
Helix 17
AB8
A
348 390Right-handed alpha
Helix 18
AB9
B
14 29Right-handed alpha
Helix 19
AC1
B
32 40Right-handed alpha
Helix 20
AC2
B
48 53Right-handed 310
Helix 21
AC3
B
54 76Right-handed alpha
Helix 22
AC4
B
83 88Right-handed alpha
Helix 23
AC5
B
88 125Right-handed alpha
Helix 24
AC6
B
130 177Right-handed alpha
Helix 25
AC7
B
177 182Right-handed alpha
Helix 26
AC8
B
193 227Right-handed alpha
Helix 27
AC9
B
228 230Right-handed 310
Helix 28
AD1
B
241 254Right-handed alpha
Helix 29
AD2
B
256 262Right-handed alpha
Helix 30
AD3
B
263 289Right-handed alpha
Helix 31
AD4
B
294 337Right-handed alpha
Helix 32
AD5
B
338 344Right-handed alpha
Helix 33
AD6
B
348 371Right-handed alpha
Helix 34
AD7
B
372 384Right-handed alpha
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There are 2 sheets in PDB entry 9G3F. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
237 238anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
237 238anti-parallel
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