Analysis of interatomic Contacts of Structural Units in PDB entry:
9G4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G4T entry

There is 1 chain in PDB entry 9G4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 48ALA 514
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9G4T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 75Right-handed alpha
Helix 2
AA2
A
75 84Right-handed alpha
Helix 3
AA3
A
91 105Right-handed alpha
Helix 4
AA4
A
109 113Right-handed 310
Helix 5
AA5
A
115 120Right-handed alpha
Helix 6
AA6
A
122 143Right-handed alpha
Helix 7
AA7
A
155 163Right-handed alpha
Helix 8
AA8
A
175 179Right-handed 310
Helix 9
AA9
A
199 203Right-handed 310
Helix 10
AB1
A
205 223Right-handed alpha
Helix 11
AB2
A
253 257Right-handed 310
Helix 12
AB3
A
259 282Right-handed alpha
Helix 13
AB4
A
321 328Right-handed alpha
Helix 14
AB5
A
332 350Right-handed alpha
Helix 15
AB6
A
351 355Right-handed 310
Helix 16
AB7
A
361 387Right-handed alpha
Helix 17
AB8
A
391 396Right-handed alpha
Helix 18
AB9
A
428 443Right-handed alpha
Helix 19
AC1
A
444 447Right-handed 310
Helix 20
AC2
A
464 483Right-handed alpha
Helix 21
AC3
A
484 490Right-handed alpha
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There are 2 sheets in PDB entry 9G4T. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
165 172parallel
Strand 3
A
234 243parallel
Strand 4
A
288 296parallel
Strand 5
A
302 305anti-parallel
Strand 6
A
318 320anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 420first strand
Strand 2
A
401 405parallel
Strand 3
A
450 458parallel
Strand 4
A
493 501parallel
Strand 5
A
508 511anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il