Analysis of interatomic Contacts of Structural Units in PDB entry:
9G5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G5I entry

There are 3 chains in PDB entry 9G5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 678CYS 1008
B
 ASP 678ILE 1022
C
 MET 93MET 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 9G5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
697 705Right-handed alpha
Helix 2
AA2
A
717 721Right-handed 310
Helix 3
AA3
A
787 796Right-handed alpha
Helix 4
AA4
A
799 808Right-handed alpha
Helix 5
AA5
A
895 899Right-handed 310
Helix 6
AA6
A
906 911Right-handed alpha
Helix 7
AA7
A
986 990Right-handed 310
Helix 8
AA8
B
697 705Right-handed alpha
Helix 9
AA9
B
717 721Right-handed 310
Helix 10
AB1
B
787 795Right-handed alpha
Helix 11
AB2
B
799 809Right-handed alpha
Helix 12
AB3
B
895 899Right-handed 310
Helix 13
AB4
B
906 911Right-handed alpha
Helix 14
AB5
C
95 103Right-handed alpha
Helix 15
AB6
C
108 122Right-handed alpha
Helix 16
AB7
C
122 127Right-handed alpha
Helix 17
AB8
C
130 144Right-handed alpha
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There are 6 sheets in PDB entry 9G5I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 685first strand
Strand 2
A
978 983anti-parallel
Strand 3
A
732 739anti-parallel
Strand 4
A
756 765anti-parallel
Strand 5
A
964 965anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 685first strand
Strand 2
A
978 983anti-parallel
Strand 3
A
732 739anti-parallel
Strand 4
A
756 765anti-parallel
Strand 5
A
970 973anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 714first strand
Strand 2
A
724 727anti-parallel
Strand 3
A
770 774anti-parallel
Strand 4
A
825 831anti-parallel
Strand 5
A
834 841anti-parallel
Strand 6
A
957 959anti-parallel
Strand 7
A
861 862parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
682 685first strand
Strand 2
B
978 983anti-parallel
Strand 3
B
732 739anti-parallel
Strand 4
B
756 765anti-parallel
Strand 5
B
964 973anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
713 714first strand
Strand 2
B
724 727anti-parallel
Strand 3
B
770 774anti-parallel
Strand 4
B
825 831anti-parallel
Strand 5
B
834 841anti-parallel
Strand 6
B
956 959anti-parallel
Strand 7
B
860 862parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
995 997first strand
Strand 2
B
1004 1006anti-parallel
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