Analysis of interatomic Contacts of Structural Units in PDB entry:
9G66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G66 entry

There are 4 chains in PDB entry 9G66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ARG 224
A
 ALA 226GLY 352
B
 ILE -4ARG 224
B
 ALA 226ARG 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 9G66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 49Right-handed 310
Helix 2
AA2
A
50 60Right-handed alpha
Helix 3
AA3
A
63 68Right-handed 310
Helix 4
AA4
A
70 78Right-handed alpha
Helix 5
AA5
A
84 98Right-handed alpha
Helix 6
AA6
A
101 105Right-handed 310
Helix 7
AA7
A
114 124Right-handed alpha
Helix 8
AA8
A
129 133Right-handed 310
Helix 9
AA9
A
135 149Right-handed alpha
Helix 10
AB1
A
161 176Right-handed alpha
Helix 11
AB2
A
178 182Right-handed 310
Helix 12
AB3
A
198 217Right-handed alpha
Helix 13
AB4
A
222 238Right-handed alpha
Helix 14
AB5
A
238 243Right-handed alpha
Helix 15
AB6
A
247 257Right-handed alpha
Helix 16
AB7
A
277 283Right-handed alpha
Helix 17
AB8
A
299 315Right-handed alpha
Helix 18
AB9
A
318 324Right-handed alpha
Helix 19
AC1
A
325 330Right-handed alpha
Helix 20
AC2
B
-3 1Right-handed 310
Helix 21
AC3
B
2 5Right-handed 310
Helix 22
AC4
B
47 49Right-handed 310
Helix 23
AC5
B
50 60Right-handed alpha
Helix 24
AC6
B
63 68Right-handed 310
Helix 25
AC7
B
70 78Right-handed alpha
Helix 26
AC8
B
84 98Right-handed alpha
Helix 27
AC9
B
101 105Right-handed 310
Helix 28
AD1
B
114 124Right-handed alpha
Helix 29
AD2
B
129 133Right-handed 310
Helix 30
AD3
B
135 150Right-handed alpha
Helix 31
AD4
B
161 176Right-handed alpha
Helix 32
AD5
B
178 182Right-handed 310
Helix 33
AD6
B
198 218Right-handed alpha
Helix 34
AD7
B
222 238Right-handed alpha
Helix 35
AD8
B
238 243Right-handed alpha
Helix 36
AD9
B
247 257Right-handed alpha
Helix 37
AE1
B
277 283Right-handed alpha
Helix 38
AE2
B
299 315Right-handed alpha
Helix 39
AE3
B
318 323Right-handed alpha
Helix 40
AE4
B
325 330Right-handed alpha
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There are 6 sheets in PDB entry 9G66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
15 28anti-parallel
Strand 3
A
289 295anti-parallel
Strand 4
A
269 274anti-parallel
Strand 5
A
260 265anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
15 28anti-parallel
Strand 3
A
7 12anti-parallel
Strand 4
A
342 345anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
183 186anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
15 28anti-parallel
Strand 3
B
289 295anti-parallel
Strand 4
B
269 274anti-parallel
Strand 5
B
260 265anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
15 28anti-parallel
Strand 3
B
7 12anti-parallel
Strand 4
B
342 345anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
192 197anti-parallel
Strand 3
B
183 186anti-parallel
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