Analysis of interatomic Contacts of Structural Units in PDB entry:
9G69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G69 entry

There are 4 chains in PDB entry 9G69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 366
B
 MET 1GLU 366
C
 LYS 118LEU 266
D
 GLY 120LEU 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 9G69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 36Right-handed alpha
Helix 2
AA2
A
53 66Right-handed alpha
Helix 3
AA3
A
79 91Right-handed alpha
Helix 4
AA4
A
121 134Right-handed alpha
Helix 5
AA5
A
155 167Right-handed alpha
Helix 6
AA6
A
184 188Right-handed 310
Helix 7
AA7
A
189 197Right-handed alpha
Helix 8
AA8
A
222 233Right-handed alpha
Helix 9
AA9
A
258 274Right-handed alpha
Helix 10
AB1
A
288 299Right-handed alpha
Helix 11
AB2
A
309 320Right-handed alpha
Helix 12
AB3
A
341 356Right-handed alpha
Helix 13
AB4
A
359 364Right-handed alpha
Helix 14
AB5
B
19 35Right-handed alpha
Helix 15
AB6
B
51 69Right-handed alpha
Helix 16
AB7
B
79 91Right-handed alpha
Helix 17
AB8
B
121 134Right-handed alpha
Helix 18
AB9
B
156 169Right-handed alpha
Helix 19
AC1
B
189 197Right-handed alpha
Helix 20
AC2
B
222 232Right-handed alpha
Helix 21
AC3
B
258 273Right-handed alpha
Helix 22
AC4
B
288 299Right-handed alpha
Helix 23
AC5
B
308 319Right-handed alpha
Helix 24
AC6
B
341 357Right-handed alpha
Helix 25
AC7
C
119 138Right-handed alpha
Helix 26
AC8
C
168 176Right-handed alpha
Helix 27
AC9
C
214 226Right-handed alpha
Helix 28
AD1
C
254 265Right-handed alpha
Helix 29
AD2
D
124 139Right-handed alpha
Helix 30
AD3
D
168 176Right-handed alpha
Helix 31
AD4
D
214 221Right-handed alpha
Helix 32
AD5
D
222 227Right-handed alpha
Helix 33
AD6
D
254 266Right-handed alpha
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There are 9 sheets in PDB entry 9G69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
108 113anti-parallel
Strand 3
A
95 97anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 204first strand
Strand 2
A
176 180parallel
Strand 3
A
236 240parallel
Strand 4
A
247 250anti-parallel
Strand 5
A
256 257anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
9 13anti-parallel
Strand 3
B
107 112anti-parallel
Strand 4
B
94 98anti-parallel
Strand 5
B
43 48parallel
Strand 6
B
71 74parallel
Strand 7
B
151 152parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 178first strand
Strand 2
B
236 239parallel
Strand 3
B
248 250anti-parallel
Strand 4
B
256 257anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
280 284first strand
Strand 2
B
301 305parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 325first strand
Strand 2
B
331 332anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
189 190first strand
Strand 2
C
193 194anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 234first strand
Strand 2
C
241 245anti-parallel
Strand 3
C
248 250anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
193 194first strand
Strand 2
D
187 190anti-parallel
Strand 3
D
143 147parallel
Strand 4
D
232 234anti-parallel
Strand 5
D
241 243anti-parallel
Strand 6
D
250 251anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il