Analysis of interatomic Contacts of Structural Units in PDB entry:
9G6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G6D entry

There are 4 chains in PDB entry 9G6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 115HIS 605
B
 LEU 73LYS 310
C
 ASN 115HIS 605
D
 ASP 79LYS 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 9G6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 170Right-handed alpha
Helix 2
AA2
A
171 197Right-handed alpha
Helix 3
AA3
A
198 202Right-handed 310
Helix 4
AA4
A
205 215Right-handed alpha
Helix 5
AA5
A
223 240Right-handed alpha
Helix 6
AA6
A
248 262Right-handed alpha
Helix 7
AA7
A
281 302Right-handed alpha
Helix 8
AA8
A
303 316Right-handed alpha
Helix 9
AA9
A
320 346Right-handed alpha
Helix 10
AB1
A
371 373Right-handed 310
Helix 11
AB2
A
374 407Right-handed alpha
Helix 12
AB3
A
409 435Right-handed alpha
Helix 13
AB4
A
461 468Right-handed alpha
Helix 14
AB5
A
469 479Right-handed alpha
Helix 15
AB6
A
486 506Right-handed alpha
Helix 16
AB7
A
513 536Right-handed alpha
Helix 17
AB8
A
543 561Right-handed alpha
Helix 18
AB9
A
563 575Right-handed alpha
Helix 19
AC1
A
576 578Right-handed 310
Helix 20
AC2
A
579 598Right-handed alpha
Helix 21
AC3
A
600 605Right-handed alpha
Helix 22
AC4
B
81 105Right-handed alpha
Helix 23
AC5
B
110 115Right-handed alpha
Helix 24
AC6
B
115 130Right-handed alpha
Helix 25
AC7
B
153 170Right-handed alpha
Helix 26
AC8
B
170 175Right-handed alpha
Helix 27
AC9
B
183 202Right-handed alpha
Helix 28
AD1
B
218 224Right-handed alpha
Helix 29
AD2
B
225 246Right-handed alpha
Helix 30
AD3
B
255 271Right-handed alpha
Helix 31
AD4
B
281 309Right-handed alpha
Helix 32
AD5
C
116 170Right-handed alpha
Helix 33
AD6
C
171 197Right-handed alpha
Helix 34
AD7
C
198 202Right-handed 310
Helix 35
AD8
C
205 215Right-handed alpha
Helix 36
AD9
C
223 240Right-handed alpha
Helix 37
AE1
C
248 262Right-handed alpha
Helix 38
AE2
C
281 302Right-handed alpha
Helix 39
AE3
C
303 316Right-handed alpha
Helix 40
AE4
C
320 347Right-handed alpha
Helix 41
AE5
C
371 373Right-handed 310
Helix 42
AE6
C
374 407Right-handed alpha
Helix 43
AE7
C
409 435Right-handed alpha
Helix 44
AE8
C
461 468Right-handed alpha
Helix 45
AE9
C
469 479Right-handed alpha
Helix 46
AF1
C
486 505Right-handed alpha
Helix 47
AF2
C
513 536Right-handed alpha
Helix 48
AF3
C
543 561Right-handed alpha
Helix 49
AF4
C
563 575Right-handed alpha
Helix 50
AF5
C
579 598Right-handed alpha
Helix 51
AF6
C
600 605Right-handed alpha
Helix 52
AF7
D
84 105Right-handed alpha
Helix 53
AF8
D
110 115Right-handed alpha
Helix 54
AF9
D
115 131Right-handed alpha
Helix 55
AG1
D
142 147Right-handed alpha
Helix 56
AG2
D
153 169Right-handed alpha
Helix 57
AG3
D
170 175Right-handed alpha
Helix 58
AG4
D
183 205Right-handed alpha
Helix 59
AG5
D
218 222Right-handed alpha
Helix 60
AG6
D
224 247Right-handed alpha
Helix 61
AG7
D
255 271Right-handed alpha
Helix 62
AG8
D
281 308Right-handed alpha
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There are 2 sheets in PDB entry 9G6D. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
458 460anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
438 440first strand
Strand 2
C
458 460anti-parallel
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