Analysis of interatomic Contacts of Structural Units in PDB entry:
9G70

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G70 entry

There are 5 chains in PDB entry 9G70 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 77	SER 479
B	GLN 77	SER 479
C	GLN 77	SER 479
D	GLN 77	SER 479
E	GLN 77	SER 479

There are 55 helices in PDB entry 9G70. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	80	84	Right-handed 310
Helix 2	AA2	A	131	134	Right-handed 310
Helix 3	AA3	A	149	153	Right-handed 310
Helix 4	AA4	A	232	235	Right-handed 310
Helix 5	AA5	A	281	288	Right-handed alpha
Helix 6	AA6	A	288	301	Right-handed alpha
Helix 7	AA7	A	302	305	Right-handed 310
Helix 8	AA8	A	309	332	Right-handed alpha
Helix 9	AA9	A	333	335	Right-handed 310
Helix 10	AB1	A	342	378	Right-handed alpha
Helix 11	AB2	A	453	479	Right-handed alpha
Helix 12	AB3	B	80	84	Right-handed 310
Helix 13	AB4	B	131	134	Right-handed 310
Helix 14	AB5	B	149	153	Right-handed 310
Helix 15	AB6	B	232	235	Right-handed 310
Helix 16	AB7	B	281	288	Right-handed alpha
Helix 17	AB8	B	288	301	Right-handed alpha
Helix 18	AB9	B	302	305	Right-handed 310
Helix 19	AC1	B	309	332	Right-handed alpha
Helix 20	AC2	B	333	335	Right-handed 310
Helix 21	AC3	B	342	378	Right-handed alpha
Helix 22	AC4	B	453	479	Right-handed alpha
Helix 23	AC5	C	80	84	Right-handed 310
Helix 24	AC6	C	131	134	Right-handed 310
Helix 25	AC7	C	149	153	Right-handed 310
Helix 26	AC8	C	232	235	Right-handed 310
Helix 27	AC9	C	281	288	Right-handed alpha
Helix 28	AD1	C	288	301	Right-handed alpha
Helix 29	AD2	C	302	305	Right-handed 310
Helix 30	AD3	C	309	332	Right-handed alpha
Helix 31	AD4	C	333	335	Right-handed 310
Helix 32	AD5	C	342	378	Right-handed alpha
Helix 33	AD6	C	453	479	Right-handed alpha
Helix 34	AD7	D	80	84	Right-handed 310
Helix 35	AD8	D	131	134	Right-handed 310
Helix 36	AD9	D	149	153	Right-handed 310
Helix 37	AE1	D	232	235	Right-handed 310
Helix 38	AE2	D	281	288	Right-handed alpha
Helix 39	AE3	D	288	301	Right-handed alpha
Helix 40	AE4	D	302	305	Right-handed 310
Helix 41	AE5	D	309	332	Right-handed alpha
Helix 42	AE6	D	333	335	Right-handed 310
Helix 43	AE7	D	342	378	Right-handed alpha
Helix 44	AE8	D	453	479	Right-handed alpha
Helix 45	AE9	E	80	84	Right-handed 310
Helix 46	AF1	E	131	134	Right-handed 310
Helix 47	AF2	E	149	153	Right-handed 310
Helix 48	AF3	E	232	235	Right-handed 310
Helix 49	AF4	E	281	288	Right-handed alpha
Helix 50	AF5	E	288	301	Right-handed alpha
Helix 51	AF6	E	302	305	Right-handed 310
Helix 52	AF7	E	309	332	Right-handed alpha
Helix 53	AF8	E	333	335	Right-handed 310
Helix 54	AF9	E	342	378	Right-handed alpha
Helix 55	AG1	E	453	479	Right-handed alpha

There are 15 sheets in PDB entry 9G70. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	176	180	anti-parallel
Strand 3	A	185	197	anti-parallel
Strand 4	A	117	129	anti-parallel
Strand 5	A	97	112	anti-parallel
Strand 6	A	226	230	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	168	first strand
Strand 2	A	185	197	anti-parallel
Strand 3	A	117	129	anti-parallel
Strand 4	A	97	112	anti-parallel
Strand 5	A	237	239	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	209	218	anti-parallel
Strand 3	A	266	279	anti-parallel
Strand 4	A	248	262	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	176	180	anti-parallel
Strand 3	B	185	197	anti-parallel
Strand 4	B	117	129	anti-parallel
Strand 5	B	97	112	anti-parallel
Strand 6	B	226	230	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	168	first strand
Strand 2	B	185	197	anti-parallel
Strand 3	B	117	129	anti-parallel
Strand 4	B	97	112	anti-parallel
Strand 5	B	237	239	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	158	161	first strand
Strand 2	B	209	218	anti-parallel
Strand 3	B	266	279	anti-parallel
Strand 4	B	248	262	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	176	180	anti-parallel
Strand 3	C	185	197	anti-parallel
Strand 4	C	117	129	anti-parallel
Strand 5	C	97	112	anti-parallel
Strand 6	C	226	230	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	168	first strand
Strand 2	C	185	197	anti-parallel
Strand 3	C	117	129	anti-parallel
Strand 4	C	97	112	anti-parallel
Strand 5	C	237	239	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	161	first strand
Strand 2	C	209	218	anti-parallel
Strand 3	C	266	279	anti-parallel
Strand 4	C	248	262	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	145	first strand
Strand 2	D	176	180	anti-parallel
Strand 3	D	185	197	anti-parallel
Strand 4	D	117	129	anti-parallel
Strand 5	D	97	112	anti-parallel
Strand 6	D	226	230	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	163	168	first strand
Strand 2	D	185	197	anti-parallel
Strand 3	D	117	129	anti-parallel
Strand 4	D	97	112	anti-parallel
Strand 5	D	237	239	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	158	161	first strand
Strand 2	D	209	218	anti-parallel
Strand 3	D	266	279	anti-parallel
Strand 4	D	248	262	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	145	first strand
Strand 2	E	176	180	anti-parallel
Strand 3	E	185	197	anti-parallel
Strand 4	E	117	129	anti-parallel
Strand 5	E	97	112	anti-parallel
Strand 6	E	226	230	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	168	first strand
Strand 2	E	185	197	anti-parallel
Strand 3	E	117	129	anti-parallel
Strand 4	E	97	112	anti-parallel
Strand 5	E	237	239	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	209	218	anti-parallel
Strand 3	E	266	279	anti-parallel
Strand 4	E	248	262	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G70

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G70