Analysis of interatomic Contacts of Structural Units in PDB entry:
9G77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G77 entry

There are 5 chains in PDB entry 9G77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 50LYS 1211
B
 GLU 41ASN 458
C
 ALA 42ASN 458
P
 G 5 T 25
T
 G 17 C 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 9G77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 71Right-handed alpha
Helix 2
AA2
A
79 93Right-handed alpha
Helix 3
AA3
A
117 130Right-handed alpha
Helix 4
AA4
A
130 142Right-handed alpha
Helix 5
AA5
A
163 165Right-handed 310
Helix 6
AA6
A
208 213Right-handed alpha
Helix 7
AA7
A
223 227Right-handed 310
Helix 8
AA8
A
254 259Right-handed alpha
Helix 9
AA9
A
260 261Right-handed 310
Helix 10
AB1
A
262 266Right-handed 310
Helix 11
AB2
A
277 286Right-handed alpha
Helix 12
AB3
A
288 299Right-handed alpha
Helix 13
AB4
A
327 332Right-handed 310
Helix 14
AB5
A
337 346Right-handed alpha
Helix 15
AB6
A
363 370Right-handed alpha
Helix 16
AB7
A
370 400Right-handed alpha
Helix 17
AB8
A
402 413Right-handed alpha
Helix 18
AB9
A
421 453Right-handed alpha
Helix 19
AC1
A
454 464Right-handed 310
Helix 20
AC2
A
515 533Right-handed alpha
Helix 21
AC3
A
534 538Right-handed 310
Helix 22
AC4
A
551 558Right-handed alpha
Helix 23
AC5
A
579 584Right-handed alpha
Helix 24
AC6
A
629 644Right-handed alpha
Helix 25
AC7
A
748 754Right-handed alpha
Helix 26
AC8
A
765 776Right-handed alpha
Helix 27
AC9
A
776 788Right-handed alpha
Helix 28
AD1
A
800 805Right-handed alpha
Helix 29
AD2
A
852 856Right-handed 310
Helix 30
AD3
A
871 886Right-handed alpha
Helix 31
AD4
A
892 901Right-handed alpha
Helix 32
AD5
A
908 918Right-handed alpha
Helix 33
AD6
A
920 934Right-handed alpha
Helix 34
AD7
A
936 948Right-handed alpha
Helix 35
AD8
A
952 966Right-handed alpha
Helix 36
AD9
A
1032 1044Right-handed alpha
Helix 37
AE1
A
1058 1061Right-handed 310
Helix 38
AE2
A
1062 1067Right-handed alpha
Helix 39
AE3
A
1071 1101Right-handed alpha
Helix 40
AE4
A
1123 1146Right-handed alpha
Helix 41
AE5
A
1152 1156Right-handed 310
Helix 42
AE6
A
1183 1188Right-handed alpha
Helix 43
AE7
A
1197 1206Right-handed alpha
Helix 44
AE8
B
42 50Right-handed alpha
Helix 45
AE9
B
56 60Right-handed 310
Helix 46
AF1
B
61 68Right-handed alpha
Helix 47
AF2
B
74 93Right-handed alpha
Helix 48
AF3
B
123 133Right-handed alpha
Helix 49
AF4
B
137 149Right-handed alpha
Helix 50
AF5
B
159 166Right-handed alpha
Helix 51
AF6
B
166 174Right-handed alpha
Helix 52
AF7
B
218 220Right-handed 310
Helix 53
AF8
B
221 240Right-handed alpha
Helix 54
AF9
B
243 245Right-handed 310
Helix 55
AG1
B
282 289Right-handed alpha
Helix 56
AG2
B
316 328Right-handed alpha
Helix 57
AG3
B
365 382Right-handed alpha
Helix 58
AG4
B
391 393Right-handed 310
Helix 59
AG5
B
398 409Right-handed alpha
Helix 60
AG6
B
420 425Right-handed alpha
Helix 61
AG7
B
444 458Right-handed alpha
Helix 62
AG8
C
43 50Right-handed alpha
Helix 63
AG9
C
56 60Right-handed 310
Helix 64
AH1
C
61 68Right-handed alpha
Helix 65
AH2
C
74 93Right-handed alpha
Helix 66
AH3
C
123 132Right-handed alpha
Helix 67
AH4
C
137 151Right-handed alpha
Helix 68
AH5
C
159 166Right-handed alpha
Helix 69
AH6
C
166 174Right-handed alpha
Helix 70
AH7
C
221 240Right-handed alpha
Helix 71
AH8
C
243 245Right-handed 310
Helix 72
AH9
C
282 289Right-handed alpha
Helix 73
AI1
C
316 328Right-handed alpha
Helix 74
AI2
C
365 384Right-handed alpha
Helix 75
AI3
C
398 409Right-handed alpha
Helix 76
AI4
C
418 424Right-handed alpha
Helix 77
AI5
C
444 457Right-handed alpha
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There are 14 sheets in PDB entry 9G77. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
158 161anti-parallel
Strand 3
A
203 207anti-parallel
Strand 4
A
192 198anti-parallel
Strand 5
A
182 184anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
247 251parallel
Strand 3
A
272 276parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 420first strand
Strand 2
A
815 818anti-parallel
Strand 3
A
791 793anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 588first strand
Strand 2
A
757 759anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 606first strand
Strand 2
A
725 728anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1105 1109first strand
Strand 2
A
1114 1120anti-parallel
Strand 3
A
862 868anti-parallel
Strand 4
A
1161 1164anti-parallel
Strand 5
A
1194 1196anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 101first strand
Strand 2
B
181 191parallel
Strand 3
B
205 217anti-parallel
Strand 4
B
308 315anti-parallel
Strand 5
B
271 280anti-parallel
Strand 6
B
259 266anti-parallel
Strand 7
B
247 253anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 108first strand
Strand 2
B
154 155anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 122first strand
Strand 2
C
120 122anti-parallel
Strand 3
C
153 155anti-parallel
Strand 4
C
107 108anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
298 299first strand
Strand 2
B
304 305anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 389first strand
Strand 2
B
357 361parallel
Strand 3
B
413 417parallel
Strand 4
B
426 431anti-parallel
Strand 5
B
437 441anti-parallel
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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
99 101first strand
Strand 2
C
180 190parallel
Strand 3
C
206 217anti-parallel
Strand 4
C
308 315anti-parallel
Strand 5
C
270 281anti-parallel
Strand 6
C
259 267anti-parallel
Strand 7
C
247 253anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
298 300first strand
Strand 2
C
303 305anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
387 388first strand
Strand 2
C
357 361parallel
Strand 3
C
413 417parallel
Strand 4
C
426 431anti-parallel
Strand 5
C
436 441anti-parallel
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