Analysis of interatomic Contacts of Structural Units in PDB entry:
9G7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G7J entry

There are 2 chains in PDB entry 9G7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 607
B
 MET 1LEU 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 9G7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 31Right-handed alpha
Helix 2
AA2
A
33 46Right-handed alpha
Helix 3
AA3
A
97 105Right-handed alpha
Helix 4
AA4
A
141 153Right-handed alpha
Helix 5
AA5
A
163 168Right-handed alpha
Helix 6
AA6
A
184 186Right-handed 310
Helix 7
AA7
A
187 195Right-handed alpha
Helix 8
AA8
A
212 230Right-handed alpha
Helix 9
AA9
A
230 235Right-handed alpha
Helix 10
AB1
A
235 241Right-handed alpha
Helix 11
AB2
A
244 252Right-handed alpha
Helix 12
AB3
A
267 271Right-handed 310
Helix 13
AB4
A
272 279Right-handed alpha
Helix 14
AB5
A
310 317Right-handed alpha
Helix 15
AB6
A
318 322Right-handed 310
Helix 16
AB7
A
325 340Right-handed alpha
Helix 17
AB8
A
342 359Right-handed alpha
Helix 18
AB9
A
363 369Right-handed alpha
Helix 19
AC1
A
378 391Right-handed alpha
Helix 20
AC2
A
395 400Right-handed alpha
Helix 21
AC3
A
402 410Right-handed alpha
Helix 22
AC4
A
412 416Right-handed 310
Helix 23
AC5
A
428 431Right-handed 310
Helix 24
AC6
A
432 442Right-handed alpha
Helix 25
AC7
A
453 458Right-handed alpha
Helix 26
AC8
A
472 491Right-handed alpha
Helix 27
AC9
A
493 498Right-handed 310
Helix 28
AD1
A
501 514Right-handed alpha
Helix 29
AD2
A
519 541Right-handed alpha
Helix 30
AD3
A
544 548Right-handed 310
Helix 31
AD4
A
551 557Right-handed alpha
Helix 32
AD5
A
570 583Right-handed alpha
Helix 33
AD6
A
591 598Right-handed alpha
Helix 34
AD7
A
600 604Right-handed 310
Helix 35
AD8
B
24 31Right-handed alpha
Helix 36
AD9
B
33 46Right-handed alpha
Helix 37
AE1
B
97 105Right-handed alpha
Helix 38
AE2
B
141 152Right-handed alpha
Helix 39
AE3
B
163 168Right-handed alpha
Helix 40
AE4
B
184 186Right-handed 310
Helix 41
AE5
B
187 195Right-handed alpha
Helix 42
AE6
B
212 230Right-handed alpha
Helix 43
AE7
B
230 235Right-handed alpha
Helix 44
AE8
B
235 241Right-handed alpha
Helix 45
AE9
B
244 252Right-handed alpha
Helix 46
AF1
B
267 271Right-handed 310
Helix 47
AF2
B
272 279Right-handed alpha
Helix 48
AF3
B
310 317Right-handed alpha
Helix 49
AF4
B
318 322Right-handed 310
Helix 50
AF5
B
325 340Right-handed alpha
Helix 51
AF6
B
342 359Right-handed alpha
Helix 52
AF7
B
363 368Right-handed alpha
Helix 53
AF8
B
369 371Right-handed 310
Helix 54
AF9
B
378 391Right-handed alpha
Helix 55
AG1
B
395 400Right-handed alpha
Helix 56
AG2
B
402 410Right-handed alpha
Helix 57
AG3
B
411 416Right-handed 310
Helix 58
AG4
B
428 431Right-handed 310
Helix 59
AG5
B
432 442Right-handed alpha
Helix 60
AG6
B
453 458Right-handed alpha
Helix 61
AG7
B
472 491Right-handed alpha
Helix 62
AG8
B
493 498Right-handed 310
Helix 63
AG9
B
501 514Right-handed alpha
Helix 64
AH1
B
519 541Right-handed alpha
Helix 65
AH2
B
544 548Right-handed 310
Helix 66
AH3
B
551 557Right-handed alpha
Helix 67
AH4
B
570 582Right-handed alpha
Helix 68
AH5
B
591 599Right-handed alpha
Helix 69
AH6
B
600 604Right-handed 310
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There are 8 sheets in PDB entry 9G7J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
7 12anti-parallel
Strand 3
A
109 113parallel
Strand 4
A
58 63anti-parallel
Strand 5
A
77 82anti-parallel
Strand 6
A
89 94anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 133first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
197 203parallel
Strand 4
A
158 161anti-parallel
Strand 5
A
175 177anti-parallel
Strand 6
A
181 183anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 284first strand
Strand 2
A
296 299anti-parallel
Strand 3
A
305 307anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
422 423anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 22first strand
Strand 2
B
7 12anti-parallel
Strand 3
B
109 113parallel
Strand 4
B
59 63anti-parallel
Strand 5
B
77 82anti-parallel
Strand 6
B
89 94anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 133first strand
Strand 2
B
120 125anti-parallel
Strand 3
B
197 203parallel
Strand 4
B
158 161anti-parallel
Strand 5
B
175 177anti-parallel
Strand 6
B
181 183anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
281 284first strand
Strand 2
B
296 299anti-parallel
Strand 3
B
305 307anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 419first strand
Strand 2
B
422 423anti-parallel
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