Analysis of interatomic Contacts of Structural Units in PDB entry:
9G7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G7M entry

There is 1 chain in PDB entry 9G7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ASP 619
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 9G7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
142 148Right-handed alpha
Helix 3
AA3
A
186 191Right-handed alpha
Helix 4
AA4
A
196 202Right-handed 310
Helix 5
AA5
A
203 215Right-handed alpha
Helix 6
AA6
A
259 271Right-handed alpha
Helix 7
AA7
A
292 306Right-handed alpha
Helix 8
AA8
A
309 311Right-handed 310
Helix 9
AA9
A
312 322Right-handed alpha
Helix 10
AB1
A
330 344Right-handed alpha
Helix 11
AB2
A
344 366Right-handed alpha
Helix 12
AB3
A
370 375Right-handed alpha
Helix 13
AB4
A
407 412Right-handed 310
Helix 14
AB5
A
429 443Right-handed alpha
Helix 15
AB6
A
454 465Right-handed alpha
Helix 16
AB7
A
474 478Right-handed 310
Helix 17
AB8
A
485 491Right-handed alpha
Helix 18
AB9
A
517 520Right-handed 310
Helix 19
AC1
A
533 543Right-handed alpha
Helix 20
AC2
A
569 574Right-handed alpha
Helix 21
AC3
A
595 599Right-handed 310
Helix 22
AC4
A
600 605Right-handed alpha
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There are 6 sheets in PDB entry 9G7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
167 180anti-parallel
Strand 3
A
42 53anti-parallel
Strand 4
A
100 109anti-parallel
Strand 5
A
116 124anti-parallel
Strand 6
A
230 234first strand
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
116 124anti-parallel
Strand 3
A
100 109anti-parallel
Strand 4
A
42 53anti-parallel
Strand 5
A
167 180anti-parallel
Strand 6
A
136 140first strand
Strand 7
A
249 253parallel
Strand 8
A
378 383anti-parallel
Strand 9
A
399 404parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
60 64anti-parallel
Strand 4
A
68 72anti-parallel
Strand 5
A
76 81anti-parallel
Strand 6
A
89 94anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
425 426anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 453first strand
Strand 2
A
508 515anti-parallel
Strand 3
A
577 580anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 483first strand
Strand 2
A
564 568anti-parallel
Strand 3
A
552 556anti-parallel
Strand 4
A
522 524parallel
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