Analysis of interatomic Contacts of Structural Units in PDB entry:
9G85

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G85 entry

There are 3 chains in PDB entry 9G85 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 3	ALA 454
B	ALA 3	GLY 451
C	ALA 3	GLU 436

There are 61 helices in PDB entry 9G85. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	25	Right-handed alpha
Helix 2	AA2	A	34	46	Right-handed alpha
Helix 3	AA3	A	60	71	Right-handed alpha
Helix 4	AA4	A	87	98	Right-handed alpha
Helix 5	AA5	A	108	139	Right-handed alpha
Helix 6	AA6	A	162	174	Right-handed alpha
Helix 7	AA7	A	184	192	Right-handed alpha
Helix 8	AA8	A	209	220	Right-handed alpha
Helix 9	AA9	A	236	247	Right-handed alpha
Helix 10	AB1	A	257	281	Right-handed alpha
Helix 11	AB2	A	299	316	Right-handed alpha
Helix 12	AB3	A	330	339	Right-handed alpha
Helix 13	AB4	A	339	357	Right-handed alpha
Helix 14	AB5	A	380	398	Right-handed alpha
Helix 15	AB6	A	426	444	Right-handed alpha
Helix 16	AB7	B	11	25	Right-handed alpha
Helix 17	AB8	B	34	46	Right-handed alpha
Helix 18	AB9	B	60	71	Right-handed alpha
Helix 19	AC1	B	87	98	Right-handed alpha
Helix 20	AC2	B	108	139	Right-handed alpha
Helix 21	AC3	B	162	174	Right-handed alpha
Helix 22	AC4	B	184	193	Right-handed alpha
Helix 23	AC5	B	209	220	Right-handed alpha
Helix 24	AC6	B	236	247	Right-handed alpha
Helix 25	AC7	B	257	280	Right-handed alpha
Helix 26	AC8	B	299	316	Right-handed alpha
Helix 27	AC9	B	330	339	Right-handed alpha
Helix 28	AD1	B	339	357	Right-handed alpha
Helix 29	AD2	B	380	397	Right-handed alpha
Helix 30	AD3	B	426	444	Right-handed alpha
Helix 31	AD4	C	11	25	Right-handed alpha
Helix 32	AD5	C	34	46	Right-handed alpha
Helix 33	AD6	C	60	71	Right-handed alpha
Helix 34	AD7	C	87	98	Right-handed alpha
Helix 35	AD8	C	108	135	Right-handed alpha
Helix 36	AD9	C	162	174	Right-handed alpha
Helix 37	AE1	C	184	193	Right-handed alpha
Helix 38	AE2	C	209	220	Right-handed alpha
Helix 39	AE3	C	236	247	Right-handed alpha
Helix 40	AE4	C	257	281	Right-handed alpha
Helix 41	AE5	C	299	316	Right-handed alpha
Helix 42	AE6	C	330	339	Right-handed alpha
Helix 43	AE7	C	339	357	Right-handed alpha
Helix 44	AE8	C	380	397	Right-handed alpha
Helix 45	AE9	C	426	444	Right-handed alpha
Helix 46	AF1	D	11	25	Right-handed alpha
Helix 47	AF2	D	34	46	Right-handed alpha
Helix 48	AF3	D	60	71	Right-handed alpha
Helix 49	AF4	D	87	98	Right-handed alpha
Helix 50	AF5	D	108	139	Right-handed alpha
Helix 51	AF6	D	162	174	Right-handed alpha
Helix 52	AF7	D	184	192	Right-handed alpha
Helix 53	AF8	D	209	220	Right-handed alpha
Helix 54	AF9	D	236	247	Right-handed alpha
Helix 55	AG1	D	257	280	Right-handed alpha
Helix 56	AG2	D	285	289	Right-handed 310
Helix 57	AG3	D	299	316	Right-handed alpha
Helix 58	AG4	D	330	339	Right-handed alpha
Helix 59	AG5	D	339	357	Right-handed alpha
Helix 60	AG6	D	380	398	Right-handed alpha
Helix 61	AG7	D	426	444	Right-handed alpha

There are 16 sheets in PDB entry 9G85. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	4	8	parallel
Strand 3	A	49	53	parallel
Strand 4	A	79	83	parallel
Strand 5	A	101	104	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	182	first strand
Strand 2	A	155	159	parallel
Strand 3	A	198	202	parallel
Strand 4	A	228	232	parallel
Strand 5	A	250	253	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	366	first strand
Strand 2	A	371	376	anti-parallel
Strand 3	A	322	328	anti-parallel
Strand 4	A	413	419	anti-parallel
Strand 5	A	449	451	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	402	first strand
Strand 2	A	407	409	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	4	8	parallel
Strand 3	B	49	53	parallel
Strand 4	B	79	83	parallel
Strand 5	B	101	104	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	182	first strand
Strand 2	B	155	159	parallel
Strand 3	B	198	202	parallel
Strand 4	B	228	232	parallel
Strand 5	B	250	253	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	366	first strand
Strand 2	B	371	376	anti-parallel
Strand 3	B	322	328	anti-parallel
Strand 4	B	413	419	anti-parallel
Strand 5	B	449	450	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	402	first strand
Strand 2	B	407	409	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	32	first strand
Strand 2	C	4	8	parallel
Strand 3	C	49	53	parallel
Strand 4	C	79	83	parallel
Strand 5	C	101	104	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	182	first strand
Strand 2	C	155	159	parallel
Strand 3	C	198	202	parallel
Strand 4	C	228	232	parallel
Strand 5	C	250	253	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	363	366	first strand
Strand 2	C	371	376	anti-parallel
Strand 3	C	322	328	anti-parallel
Strand 4	C	413	419	anti-parallel
Strand 5	C	449	451	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	400	402	first strand
Strand 2	C	407	409	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	4	8	parallel
Strand 3	D	49	53	parallel
Strand 4	D	79	83	parallel
Strand 5	D	101	104	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	178	182	first strand
Strand 2	D	155	159	parallel
Strand 3	D	198	202	parallel
Strand 4	D	228	232	parallel
Strand 5	D	250	253	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	363	366	first strand
Strand 2	D	371	376	anti-parallel
Strand 3	D	322	328	anti-parallel
Strand 4	D	413	419	anti-parallel
Strand 5	D	449	451	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	400	402	first strand
Strand 2	D	407	409	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G85

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G85