Analysis of interatomic Contacts of Structural Units in PDB entry:
9G8E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G8E entry

There is 1 chain in PDB entry 9G8E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 102HIS 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 9G8E. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
173 182Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9G8E.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
124 126first strand
Strand 2
A
163 170anti-parallel
Strand 3
A
147 157anti-parallel
Strand 4
A
139 144anti-parallel
Strand 5
A
134 136anti-parallel
Strand 6
A
199 200parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il