Analysis of interatomic Contacts of Structural Units in PDB entry:
9G8J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9G8J entry

There are 4 chains in PDB entry 9G8J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 2	PHE 726
B	TYR 2	PHE 726
C	TYR 2	PHE 726
D	TYR 2	PHE 726

There are 96 helices in PDB entry 9G8J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	26	Right-handed alpha
Helix 2	AA2	A	33	72	Right-handed alpha
Helix 3	AA3	A	73	113	Right-handed alpha
Helix 4	AA4	A	114	150	Right-handed alpha
Helix 5	AA5	A	153	158	Right-handed alpha
Helix 6	AA6	A	170	212	Right-handed alpha
Helix 7	AA7	A	224	236	Right-handed alpha
Helix 8	AA8	A	237	266	Right-handed alpha
Helix 9	AA9	A	279	311	Right-handed alpha
Helix 10	AB1	A	316	345	Right-handed alpha
Helix 11	AB2	A	360	385	Right-handed alpha
Helix 12	AB3	A	388	401	Right-handed alpha
Helix 13	AB4	A	401	448	Right-handed alpha
Helix 14	AB5	A	450	474	Right-handed alpha
Helix 15	AB6	A	477	521	Right-handed alpha
Helix 16	AB7	A	530	535	Right-handed alpha
Helix 17	AB8	A	541	584	Right-handed alpha
Helix 18	AB9	A	596	611	Right-handed alpha
Helix 19	AC1	A	611	668	Right-handed alpha
Helix 20	AC2	A	678	697	Right-handed alpha
Helix 21	AC3	A	697	723	Right-handed alpha
Helix 22	AC4	B	3	26	Right-handed alpha
Helix 23	AC5	B	37	72	Right-handed alpha
Helix 24	AC6	B	73	113	Right-handed alpha
Helix 25	AC7	B	114	149	Right-handed alpha
Helix 26	AC8	B	153	158	Right-handed alpha
Helix 27	AC9	B	170	211	Right-handed alpha
Helix 28	AD1	B	224	236	Right-handed alpha
Helix 29	AD2	B	237	266	Right-handed alpha
Helix 30	AD3	B	279	311	Right-handed alpha
Helix 31	AD4	B	316	345	Right-handed alpha
Helix 32	AD5	B	349	354	Right-handed alpha
Helix 33	AD6	B	360	385	Right-handed alpha
Helix 34	AD7	B	388	397	Right-handed alpha
Helix 35	AD8	B	398	400	Right-handed 310
Helix 36	AD9	B	401	417	Right-handed alpha
Helix 37	AE1	B	417	447	Right-handed alpha
Helix 38	AE2	B	450	474	Right-handed alpha
Helix 39	AE3	B	477	521	Right-handed alpha
Helix 40	AE4	B	530	535	Right-handed alpha
Helix 41	AE5	B	541	584	Right-handed alpha
Helix 42	AE6	B	595	611	Right-handed alpha
Helix 43	AE7	B	611	630	Right-handed alpha
Helix 44	AE8	B	630	668	Right-handed alpha
Helix 45	AE9	B	678	697	Right-handed alpha
Helix 46	AF1	B	697	723	Right-handed alpha
Helix 47	AF2	C	3	25	Right-handed alpha
Helix 48	AF3	C	32	72	Right-handed alpha
Helix 49	AF4	C	73	109	Right-handed alpha
Helix 50	AF5	C	114	150	Right-handed alpha
Helix 51	AF6	C	153	158	Right-handed alpha
Helix 52	AF7	C	170	212	Right-handed alpha
Helix 53	AF8	C	224	236	Right-handed alpha
Helix 54	AF9	C	237	266	Right-handed alpha
Helix 55	AG1	C	279	311	Right-handed alpha
Helix 56	AG2	C	318	346	Right-handed alpha
Helix 57	AG3	C	360	385	Right-handed alpha
Helix 58	AG4	C	388	397	Right-handed alpha
Helix 59	AG5	C	398	400	Right-handed 310
Helix 60	AG6	C	401	417	Right-handed alpha
Helix 61	AG7	C	417	435	Right-handed alpha
Helix 62	AG8	C	436	447	Right-handed alpha
Helix 63	AG9	C	450	474	Right-handed alpha
Helix 64	AH1	C	477	521	Right-handed alpha
Helix 65	AH2	C	530	535	Right-handed alpha
Helix 66	AH3	C	541	584	Right-handed alpha
Helix 67	AH4	C	595	611	Right-handed alpha
Helix 68	AH5	C	611	630	Right-handed alpha
Helix 69	AH6	C	630	668	Right-handed alpha
Helix 70	AH7	C	678	697	Right-handed alpha
Helix 71	AH8	C	697	723	Right-handed alpha
Helix 72	AH9	D	3	27	Right-handed alpha
Helix 73	AI1	D	32	72	Right-handed alpha
Helix 74	AI2	D	73	113	Right-handed alpha
Helix 75	AI3	D	114	150	Right-handed alpha
Helix 76	AI4	D	153	158	Right-handed alpha
Helix 77	AI5	D	170	211	Right-handed alpha
Helix 78	AI6	D	224	237	Right-handed alpha
Helix 79	AI7	D	237	266	Right-handed alpha
Helix 80	AI8	D	279	310	Right-handed alpha
Helix 81	AI9	D	316	344	Right-handed alpha
Helix 82	AJ1	D	360	385	Right-handed alpha
Helix 83	AJ2	D	388	397	Right-handed alpha
Helix 84	AJ3	D	398	400	Right-handed 310
Helix 85	AJ4	D	401	417	Right-handed alpha
Helix 86	AJ5	D	417	435	Right-handed alpha
Helix 87	AJ6	D	436	448	Right-handed alpha
Helix 88	AJ7	D	450	474	Right-handed alpha
Helix 89	AJ8	D	481	521	Right-handed alpha
Helix 90	AJ9	D	530	535	Right-handed alpha
Helix 91	AK1	D	541	584	Right-handed alpha
Helix 92	AK2	D	597	611	Right-handed alpha
Helix 93	AK3	D	611	629	Right-handed alpha
Helix 94	AK4	D	630	668	Right-handed alpha
Helix 95	AK5	D	678	697	Right-handed alpha
Helix 96	AK6	D	697	723	Right-handed alpha

There are 6 sheets in PDB entry 9G8J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	A	167	169	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	270	first strand
Strand 2	A	273	276	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	167	169	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	167	169	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	269	first strand
Strand 2	C	274	276	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	167	169	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9G8J

Analysis of interatomic Contacts of Structural Units in PDB entry:
9G8J