Analysis of interatomic Contacts of Structural Units in PDB entry:
9G8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9G8N entry

There are 13 chains in PDB entry 9G8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
LEU 3GLY 243
N
GLU 9MET 273
O
CYS 26SER 233
F
THR 5LEU 290
H
ALA 17SER 275
J
VAL 5VAL 188
X
U 1 U 44
A
GLN 282GLN 1246
G
GLY 3ALA 270
I
MET 1GLY 293
E
ALA 555GLU 632
K
MET 1SER 353
M
MET 1ASN 1050
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 9G8N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
L
92 110Right-handed alpha
Helix 2
AA2
L
132 149Right-handed alpha
Helix 3
AA3
L
173 178Right-handed alpha
Helix 4
AA4
L
208 242Right-handed alpha
Helix 5
AA5
N
10 21Right-handed alpha
Helix 6
AA6
N
99 117Right-handed alpha
Helix 7
AA7
N
120 123Right-handed 310
Helix 8
AA8
N
147 161Right-handed alpha
Helix 9
AA9
N
211 218Right-handed alpha
Helix 10
AB1
N
244 270Right-handed alpha
Helix 11
AB2
O
88 103Right-handed alpha
Helix 12
AB3
O
107 111Right-handed 310
Helix 13
AB4
O
128 145Right-handed alpha
Helix 14
AB5
O
170 177Right-handed alpha
Helix 15
AB6
O
202 232Right-handed alpha
Helix 16
AB7
F
7 20Right-handed alpha
Helix 17
AB8
F
90 94Right-handed 310
Helix 18
AB9
F
98 114Right-handed alpha
Helix 19
AC1
F
147 161Right-handed alpha
Helix 20
AC2
F
215 221Right-handed alpha
Helix 21
AC3
F
248 280Right-handed alpha
Helix 22
AC4
H
144 146Right-handed 310
Helix 23
AC5
H
203 211Right-handed alpha
Helix 24
AC6
H
216 225Right-handed alpha
Helix 25
AC7
H
243 255Right-handed alpha
Helix 26
AC8
H
265 275Right-handed alpha
Helix 27
AC9
A
312 323Right-handed alpha
Helix 28
AD1
A
334 351Right-handed alpha
Helix 29
AD2
A
362 377Right-handed alpha
Helix 30
AD3
A
399 409Right-handed alpha
Helix 31
AD4
A
413 415Right-handed 310
Helix 32
AD5
A
424 428Right-handed 310
Helix 33
AD6
A
433 444Right-handed alpha
Helix 34
AD7
A
459 471Right-handed alpha
Helix 35
AD8
A
514 520Right-handed alpha
Helix 36
AD9
A
521 525Right-handed 310
Helix 37
AE1
A
549 558Right-handed alpha
Helix 38
AE2
A
575 585Right-handed alpha
Helix 39
AE3
A
593 609Right-handed alpha
Helix 40
AE4
A
612 617Right-handed alpha
Helix 41
AE5
A
618 630Right-handed alpha
Helix 42
AE6
A
640 653Right-handed alpha
Helix 43
AE7
A
693 702Right-handed alpha
Helix 44
AE8
A
725 734Right-handed alpha
Helix 45
AE9
A
747 757Right-handed alpha
Helix 46
AF1
A
761 768Right-handed alpha
Helix 47
AF2
A
772 777Right-handed alpha
Helix 48
AF3
A
778 794Right-handed alpha
Helix 49
AF4
A
807 832Right-handed alpha
Helix 50
AF5
A
832 839Right-handed alpha
Helix 51
AF6
A
884 888Right-handed 310
Helix 52
AF7
A
897 902Right-handed alpha
Helix 53
AF8
A
921 923Right-handed 310
Helix 54
AF9
A
936 948Right-handed alpha
Helix 55
AG1
A
958 975Right-handed alpha
Helix 56
AG2
A
992 1010Right-handed alpha
Helix 57
AG3
A
1019 1044Right-handed alpha
Helix 58
AG4
A
1045 1049Right-handed 310
Helix 59
AG5
A
1051 1065Right-handed alpha
Helix 60
AG6
A
1076 1081Right-handed alpha
Helix 61
AG7
A
1087 1097Right-handed alpha
Helix 62
AG8
A
1104 1112Right-handed alpha
Helix 63
AG9
A
1113 1116Right-handed 310
Helix 64
AH1
A
1130 1135Right-handed alpha
Helix 65
AH2
A
1135 1151Right-handed alpha
Helix 66
AH3
A
1157 1164Right-handed alpha
Helix 67
AH4
A
1171 1179Right-handed alpha
Helix 68
AH5
A
1181 1189Right-handed alpha
Helix 69
AH6
A
1194 1218Right-handed alpha
Helix 70
AH7
A
1219 1234Right-handed alpha
Helix 71
AH8
A
1237 1241Right-handed 310
Helix 72
AH9
G
116 131Right-handed alpha
Helix 73
AI1
G
162 172Right-handed alpha
Helix 74
AI2
G
200 205Right-handed alpha
Helix 75
AI3
G
235 251Right-handed alpha
Helix 76
AI4
G
251 269Right-handed alpha
Helix 77
AI5
I
125 135Right-handed alpha
Helix 78
AI6
I
227 248Right-handed alpha
Helix 79
AI7
I
252 263Right-handed alpha
Helix 80
AI8
I
273 293Right-handed alpha
Helix 81
AI9
E
561 568Right-handed alpha
Helix 82
AJ1
E
616 629Right-handed alpha
Helix 83
AJ2
K
8 21Right-handed alpha
Helix 84
AJ3
K
98 113Right-handed alpha
Helix 85
AJ4
K
144 158Right-handed alpha
Helix 86
AJ5
K
210 216Right-handed alpha
Helix 87
AJ6
K
244 279Right-handed alpha
Helix 88
AJ7
K
284 288Right-handed 310
Helix 89
AJ8
K
307 318Right-handed alpha
Helix 90
AJ9
M
63 68Right-handed alpha
Helix 91
AK1
M
69 73Right-handed 310
Helix 92
AK2
M
85 95Right-handed alpha
Helix 93
AK3
M
97 108Right-handed alpha
Helix 94
AK4
M
118 122Right-handed 310
Helix 95
AK5
M
134 154Right-handed alpha
Helix 96
AK6
M
167 173Right-handed alpha
Helix 97
AK7
M
174 176Right-handed 310
Helix 98
AK8
M
184 193Right-handed alpha
Helix 99
AK9
M
196 219Right-handed alpha
Helix 100
AL1
M
231 240Right-handed alpha
Helix 101
AL2
M
300 304Right-handed 310
Helix 102
AL3
M
351 355Right-handed 310
Helix 103
AL4
M
383 387Right-handed 310
Helix 104
AL5
M
419 431Right-handed alpha
Helix 105
AL6
M
439 445Right-handed alpha
Helix 106
AL7
M
458 465Right-handed alpha
Helix 107
AL8
M
516 525Right-handed alpha
Helix 108
AL9
M
589 597Right-handed alpha
Helix 109
AM1
M
615 647Right-handed alpha
Helix 110
AM2
M
675 700Right-handed alpha
Helix 111
AM3
M
713 725Right-handed alpha
Helix 112
AM4
M
735 745Right-handed alpha
Helix 113
AM5
M
752 764Right-handed alpha
Helix 114
AM6
M
773 777Right-handed 310
Helix 115
AM7
M
778 783Right-handed 310
Helix 116
AM8
M
784 788Right-handed 310
Helix 117
AM9
M
802 818Right-handed alpha
Helix 118
AN1
M
829 863Right-handed alpha
Helix 119
AN2
M
1017 1025Right-handed alpha
Helix 120
AN3
M
1032 1045Right-handed alpha
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There are 49 sheets in PDB entry 9G8N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
26 28first strand
Strand 2
L
38 42anti-parallel
Strand 3
L
45 46anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
49 55first strand
Strand 2
L
119 126anti-parallel
Strand 3
L
70 73parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
49 55first strand
Strand 2
L
119 126anti-parallel
Strand 3
L
76 77parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
167 170first strand
Strand 2
L
160 164anti-parallel
Strand 3
L
184 185anti-parallel
Strand 4
L
199 200anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
188 189first strand
Strand 2
L
194 195anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
204 205first strand
Strand 2
K
230 237anti-parallel
Strand 3
K
219 226anti-parallel
Strand 4
K
195 199anti-parallel
Strand 5
K
204 207anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
79 84first strand
Strand 2
N
131 141parallel
Strand 3
N
125 127anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
79 84first strand
Strand 2
N
131 141parallel
Strand 3
N
58 67anti-parallel
Strand 4
N
47 52anti-parallel
Strand 5
N
35 39anti-parallel
Strand 6
K
336 339anti-parallel
Strand 7
K
330 333anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
166 170first strand
Strand 2
N
177 184anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
206 208first strand
Strand 2
N
194 200anti-parallel
Strand 3
N
221 226anti-parallel
Strand 4
N
232 236anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
75 81first strand
Strand 2
O
115 124parallel
Strand 3
O
52 62anti-parallel
Strand 4
O
43 49anti-parallel
Strand 5
O
31 35anti-parallel
Strand 6
K
295 298anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
152 159first strand
Strand 2
O
179 186anti-parallel
Strand 3
O
192 199anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
48 49first strand
Strand 2
F
57 67anti-parallel
Strand 3
F
132 143anti-parallel
Strand 4
F
78 85parallel
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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
209 212first strand
Strand 2
F
199 206anti-parallel
Strand 3
F
224 230anti-parallel
Strand 4
F
236 243anti-parallel
Strand 5
G
221 228anti-parallel
Strand 6
G
210 216anti-parallel
Strand 7
G
181 182anti-parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
209 212first strand
Strand 2
F
199 206anti-parallel
Strand 3
F
224 230anti-parallel
Strand 4
F
236 243anti-parallel
Strand 5
G
221 228anti-parallel
Strand 6
G
210 216anti-parallel
Strand 7
G
185 187anti-parallel
Strand 8
G
195 197anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
18 19first strand
Strand 2
H
33 35parallel
Strand 3
H
77 80anti-parallel
Strand 4
H
71 74anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
27 28first strand
Strand 2
H
84 88anti-parallel
Strand 3
H
100 103anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
139 142first strand
Strand 2
H
128 132anti-parallel
Strand 3
H
116 121anti-parallel
Strand 4
H
162 169anti-parallel
Strand 5
H
177 179anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
139 142first strand
Strand 2
H
128 132anti-parallel
Strand 3
H
116 121anti-parallel
Strand 4
H
162 169anti-parallel
Strand 5
H
191 192anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
198 201first strand
Strand 2
H
236 239anti-parallel
Strand 3
H
229 232anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
13 16first strand
Strand 2
J
32 35anti-parallel
Strand 3
J
26 29anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
21 22first strand
Strand 2
J
52 56parallel
Strand 3
J
40 44anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
93 94first strand
Strand 2
J
83 90anti-parallel
Strand 3
J
70 78anti-parallel
Strand 4
J
127 132anti-parallel
Strand 5
J
144 145anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
101 102first strand
Strand 2
J
83 90anti-parallel
Strand 3
J
70 78anti-parallel
Strand 4
J
127 132anti-parallel
Strand 5
J
152 155anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
171 173first strand
Strand 2
J
180 182anti-parallel
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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
284 286first strand
Strand 2
A
475 479parallel
Strand 3
A
327 331parallel
Strand 4
A
449 454parallel
Strand 5
A
417 422parallel
Strand 6
A
355 359parallel
Strand 7
A
395 398parallel
Strand 8
A
380 383parallel
Strand 9
A
388 389anti-parallel
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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
502 507first strand
Strand 2
A
487 493anti-parallel
Strand 3
A
713 718parallel
Strand 4
A
675 678parallel
Strand 5
A
569 571parallel
Strand 6
A
658 661parallel
Strand 7
A
632 635parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
913 920first strand
Strand 2
A
871 878anti-parallel
Strand 3
A
855 862anti-parallel
Strand 4
A
843 847anti-parallel
Strand 5
A
925 932anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
39 43first strand
Strand 2
G
51 57anti-parallel
Strand 3
G
60 70anti-parallel
Strand 4
G
143 152anti-parallel
Strand 5
G
95 102parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
26 27first strand
Strand 2
I
58 60anti-parallel
Strand 3
I
69 71anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
32 33first strand
Strand 2
I
52 54anti-parallel
Strand 3
I
45 47anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
40 41first strand
Strand 2
I
66 67parallel
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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
83 91first strand
Strand 2
I
95 99anti-parallel
Strand 3
I
106 109anti-parallel
Strand 4
I
154 157parallel
Strand 5
I
140 148anti-parallel
Strand 6
I
83 91anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
170 173first strand
Strand 2
I
202 205anti-parallel
Strand 3
I
195 197anti-parallel
Strand 4
I
186 187anti-parallel
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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
35 39first strand
Strand 2
K
45 50anti-parallel
Strand 3
K
53 60anti-parallel
Strand 4
K
132 140anti-parallel
Strand 5
K
76 77parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
63 64first strand
Strand 2
K
129 130anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
4 12first strand
Strand 2
M
18 26anti-parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
58 60first strand
Strand 2
M
160 163parallel
Strand 3
M
180 183parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
81 84first strand
Strand 2
M
114 117parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
244 246first strand
Strand 2
M
293 297anti-parallel
Strand 3
M
333 339anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
248 250first strand
Strand 2
M
258 261anti-parallel
Strand 3
M
277 280anti-parallel
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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
346 348first strand
Strand 2
M
364 369anti-parallel
Strand 3
M
377 380anti-parallel
Strand 4
M
406 416parallel
Strand 5
M
390 399anti-parallel
Strand 6
M
346 348anti-parallel
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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
489 493first strand
Strand 2
M
499 505anti-parallel
Strand 3
M
556 560anti-parallel
Strand 4
M
580 582anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
656 660first strand
Strand 2
M
666 671anti-parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
706 708first strand
Strand 2
M
770 772anti-parallel
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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
879 882first strand
Strand 2
M
889 891anti-parallel
Strand 3
M
898 900anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
911 913first strand
Strand 2
M
919 921anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
924 928first strand
Strand 2
M
933 937anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
953 958first strand
Strand 2
M
966 971anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il