Analysis of interatomic Contacts of Structural Units in PDB entry:
9GA8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GA8 entry

There is 1 chain in PDB entry 9GA8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ASP 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 9GA8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
33 42Right-handed alpha
Helix 3
AA3
A
45 61Right-handed alpha
Helix 4
AA4
A
63 72Right-handed alpha
Helix 5
AA5
A
73 85Right-handed alpha
Helix 6
AA6
A
86 100Right-handed alpha
Helix 7
AA7
A
105 116Right-handed alpha
Helix 8
AA8
A
117 133Right-handed alpha
Helix 9
AA9
A
135 144Right-handed alpha
Helix 10
AB1
A
145 158Right-handed alpha
Helix 11
AB2
A
167 182Right-handed alpha
Helix 12
AB3
A
189 200Right-handed alpha
Helix 13
AB4
A
201 217Right-handed alpha
Helix 14
AB5
A
219 228Right-handed alpha
Helix 15
AB6
A
229 245Right-handed alpha
Helix 16
AB7
A
245 260Right-handed alpha
Helix 17
AB8
A
264 276Right-handed alpha
Helix 18
AB9
A
279 292Right-handed alpha
Helix 19
AC1
A
294 303Right-handed alpha
Helix 20
AC2
A
304 316Right-handed alpha
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There are no sheets in PDB entry 9GA8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il