Analysis of interatomic Contacts of Structural Units in PDB entry:
9GI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9GI2 entry

There are 2 chains in PDB entry 9GI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3GLN 76
B
 GLU 16ARG 939
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 9GI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 15Right-handed alpha
Helix 2
AA2
A
35 50Right-handed alpha
Helix 3
AA3
A
55 60Right-handed alpha
Helix 4
AA4
A
64 76Right-handed alpha
Helix 5
AA5
B
18 27Right-handed alpha
Helix 6
AA6
B
27 42Right-handed alpha
Helix 7
AA7
B
48 56Right-handed alpha
Helix 8
AA8
B
65 79Right-handed alpha
Helix 9
AA9
B
98 115Right-handed alpha
Helix 10
AB1
B
128 133Right-handed alpha
Helix 11
AB2
B
155 172Right-handed alpha
Helix 12
AB3
B
184 199Right-handed alpha
Helix 13
AB4
B
199 220Right-handed alpha
Helix 14
AB5
B
221 249Right-handed alpha
Helix 15
AB6
B
255 287Right-handed alpha
Helix 16
AB7
B
290 319Right-handed alpha
Helix 17
AB8
B
320 323Right-handed 310
Helix 18
AB9
B
325 330Right-handed alpha
Helix 19
AC1
B
331 360Right-handed alpha
Helix 20
AC2
B
371 384Right-handed alpha
Helix 21
AC3
B
384 398Right-handed alpha
Helix 22
AC4
B
399 406Right-handed 310
Helix 23
AC5
B
411 416Right-handed 310
Helix 24
AC6
B
420 433Right-handed alpha
Helix 25
AC7
B
434 439Right-handed 310
Helix 26
AC8
B
453 469Right-handed alpha
Helix 27
AC9
B
693 704Right-handed alpha
Helix 28
AD1
B
723 742Right-handed alpha
Helix 29
AD2
B
744 749Right-handed 310
Helix 30
AD3
B
756 791Right-handed alpha
Helix 31
AD4
B
792 819Right-handed alpha
Helix 32
AD5
B
828 857Right-handed alpha
Helix 33
AD6
B
860 889Right-handed alpha
Helix 34
AD7
B
890 893Right-handed 310
Helix 35
AD8
B
895 915Right-handed alpha
Helix 36
AD9
B
919 929Right-handed alpha
Helix 37
AE1
B
930 934Right-handed 310
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There are 2 sheets in PDB entry 9GI2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
142 149anti-parallel
Strand 3
B
86 93anti-parallel
Strand 4
B
178 183anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 477first strand
Strand 2
B
710 717anti-parallel
Strand 3
B
441 446anti-parallel
Strand 4
B
750 755anti-parallel
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