Analysis of interatomic Contacts of Structural Units in PDB entry:
9GK2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9GK2 entry

There are 18 chains in PDB entry 9GK2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
G	GLU 32	ALA 463
H	GLU 32	ALA 463
I	GLU 32	ALA 463
J	GLU 32	ALA 463
K	GLU 32	ALA 463
L	GLU 32	ALA 463
M	GLU 32	ALA 463
N	GLU 32	ALA 463
O	GLU 32	ALA 463
P	GLU 32	ALA 463
Q	GLU 32	ALA 463
R	GLU 32	ALA 463
S	GLU 32	ALA 463
T	GLU 32	ALA 463
U	GLU 32	ALA 463
V	GLU 32	ALA 463
W	GLU 32	ALA 463
X	GLU 32	ALA 463

There are216 helices in PDB entry 9GK2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	60	81	Right-handed alpha
Helix 2	AA2	G	82	91	Right-handed alpha
Helix 3	AA3	G	103	162	Right-handed alpha
Helix 4	AA4	G	171	174	Right-handed 310
Helix 5	AA5	G	175	186	Right-handed alpha
Helix 6	AA6	G	212	235	Right-handed alpha
Helix 7	AA7	G	250	286	Right-handed alpha
Helix 8	AA8	G	287	321	Right-handed alpha
Helix 9	AA9	G	334	342	Right-handed alpha
Helix 10	AB1	G	342	367	Right-handed alpha
Helix 11	AB2	G	380	406	Right-handed alpha
Helix 12	AB3	G	406	463	Right-handed alpha
Helix 13	AB4	H	60	81	Right-handed alpha
Helix 14	AB5	H	82	91	Right-handed alpha
Helix 15	AB6	H	103	162	Right-handed alpha
Helix 16	AB7	H	171	174	Right-handed 310
Helix 17	AB8	H	175	186	Right-handed alpha
Helix 18	AB9	H	212	235	Right-handed alpha
Helix 19	AC1	H	250	286	Right-handed alpha
Helix 20	AC2	H	287	321	Right-handed alpha
Helix 21	AC3	H	334	342	Right-handed alpha
Helix 22	AC4	H	342	367	Right-handed alpha
Helix 23	AC5	H	380	406	Right-handed alpha
Helix 24	AC6	H	406	463	Right-handed alpha
Helix 25	AC7	I	60	81	Right-handed alpha
Helix 26	AC8	I	82	91	Right-handed alpha
Helix 27	AC9	I	103	162	Right-handed alpha
Helix 28	AD1	I	171	174	Right-handed 310
Helix 29	AD2	I	175	186	Right-handed alpha
Helix 30	AD3	I	212	235	Right-handed alpha
Helix 31	AD4	I	250	286	Right-handed alpha
Helix 32	AD5	I	287	321	Right-handed alpha
Helix 33	AD6	I	334	342	Right-handed alpha
Helix 34	AD7	I	342	367	Right-handed alpha
Helix 35	AD8	I	380	406	Right-handed alpha
Helix 36	AD9	I	406	463	Right-handed alpha
Helix 37	AE1	J	60	81	Right-handed alpha
Helix 38	AE2	J	82	91	Right-handed alpha
Helix 39	AE3	J	103	162	Right-handed alpha
Helix 40	AE4	J	171	174	Right-handed 310
Helix 41	AE5	J	175	186	Right-handed alpha
Helix 42	AE6	J	212	235	Right-handed alpha
Helix 43	AE7	J	250	286	Right-handed alpha
Helix 44	AE8	J	287	321	Right-handed alpha
Helix 45	AE9	J	334	342	Right-handed alpha
Helix 46	AF1	J	342	367	Right-handed alpha
Helix 47	AF2	J	380	406	Right-handed alpha
Helix 48	AF3	J	406	463	Right-handed alpha
Helix 49	AF4	K	60	81	Right-handed alpha
Helix 50	AF5	K	82	91	Right-handed alpha
Helix 51	AF6	K	103	162	Right-handed alpha
Helix 52	AF7	K	171	174	Right-handed 310
Helix 53	AF8	K	175	186	Right-handed alpha
Helix 54	AF9	K	212	235	Right-handed alpha
Helix 55	AG1	K	250	286	Right-handed alpha
Helix 56	AG2	K	287	321	Right-handed alpha
Helix 57	AG3	K	334	342	Right-handed alpha
Helix 58	AG4	K	342	367	Right-handed alpha
Helix 59	AG5	K	380	406	Right-handed alpha
Helix 60	AG6	K	406	463	Right-handed alpha
Helix 61	AG7	L	60	81	Right-handed alpha
Helix 62	AG8	L	82	91	Right-handed alpha
Helix 63	AG9	L	103	162	Right-handed alpha
Helix 64	AH1	L	171	174	Right-handed 310
Helix 65	AH2	L	175	186	Right-handed alpha
Helix 66	AH3	L	212	235	Right-handed alpha
Helix 67	AH4	L	250	286	Right-handed alpha
Helix 68	AH5	L	287	321	Right-handed alpha
Helix 69	AH6	L	334	342	Right-handed alpha
Helix 70	AH7	L	342	367	Right-handed alpha
Helix 71	AH8	L	380	406	Right-handed alpha
Helix 72	AH9	L	406	463	Right-handed alpha
Helix 73	AI1	M	60	81	Right-handed alpha
Helix 74	AI2	M	82	91	Right-handed alpha
Helix 75	AI3	M	103	162	Right-handed alpha
Helix 76	AI4	M	171	174	Right-handed 310
Helix 77	AI5	M	175	186	Right-handed alpha
Helix 78	AI6	M	212	235	Right-handed alpha
Helix 79	AI7	M	250	286	Right-handed alpha
Helix 80	AI8	M	287	321	Right-handed alpha
Helix 81	AI9	M	334	342	Right-handed alpha
Helix 82	AJ1	M	342	367	Right-handed alpha
Helix 83	AJ2	M	380	406	Right-handed alpha
Helix 84	AJ3	M	406	463	Right-handed alpha
Helix 85	AJ4	N	60	81	Right-handed alpha
Helix 86	AJ5	N	82	91	Right-handed alpha
Helix 87	AJ6	N	103	162	Right-handed alpha
Helix 88	AJ7	N	171	174	Right-handed 310
Helix 89	AJ8	N	175	186	Right-handed alpha
Helix 90	AJ9	N	212	235	Right-handed alpha
Helix 91	AK1	N	250	286	Right-handed alpha
Helix 92	AK2	N	287	321	Right-handed alpha
Helix 93	AK3	N	334	342	Right-handed alpha
Helix 94	AK4	N	342	367	Right-handed alpha
Helix 95	AK5	N	380	406	Right-handed alpha
Helix 96	AK6	N	406	463	Right-handed alpha
Helix 97	AK7	O	60	81	Right-handed alpha
Helix 98	AK8	O	82	91	Right-handed alpha
Helix 99	AK9	O	103	162	Right-handed alpha
Helix 100	AL1	O	171	174	Right-handed 310
Helix 101	AL2	O	175	186	Right-handed alpha
Helix 102	AL3	O	212	235	Right-handed alpha
Helix 103	AL4	O	250	286	Right-handed alpha
Helix 104	AL5	O	287	321	Right-handed alpha
Helix 105	AL6	O	334	342	Right-handed alpha
Helix 106	AL7	O	342	367	Right-handed alpha
Helix 107	AL8	O	380	406	Right-handed alpha
Helix 108	AL9	O	406	463	Right-handed alpha
Helix 109	AM1	P	60	81	Right-handed alpha
Helix 110	AM2	P	82	91	Right-handed alpha
Helix 111	AM3	P	103	162	Right-handed alpha
Helix 112	AM4	P	171	174	Right-handed 310
Helix 113	AM5	P	175	186	Right-handed alpha
Helix 114	AM6	P	212	235	Right-handed alpha
Helix 115	AM7	P	250	286	Right-handed alpha
Helix 116	AM8	P	287	321	Right-handed alpha
Helix 117	AM9	P	334	342	Right-handed alpha
Helix 118	AN1	P	342	367	Right-handed alpha
Helix 119	AN2	P	380	406	Right-handed alpha
Helix 120	AN3	P	406	463	Right-handed alpha
Helix 121	AN4	Q	60	81	Right-handed alpha
Helix 122	AN5	Q	82	91	Right-handed alpha
Helix 123	AN6	Q	103	162	Right-handed alpha
Helix 124	AN7	Q	171	174	Right-handed 310
Helix 125	AN8	Q	175	186	Right-handed alpha
Helix 126	AN9	Q	212	235	Right-handed alpha
Helix 127	AO1	Q	250	286	Right-handed alpha
Helix 128	AO2	Q	287	321	Right-handed alpha
Helix 129	AO3	Q	334	342	Right-handed alpha
Helix 130	AO4	Q	342	367	Right-handed alpha
Helix 131	AO5	Q	380	406	Right-handed alpha
Helix 132	AO6	Q	406	463	Right-handed alpha
Helix 133	AO7	R	60	81	Right-handed alpha
Helix 134	AO8	R	82	91	Right-handed alpha
Helix 135	AO9	R	103	162	Right-handed alpha
Helix 136	AP1	R	171	174	Right-handed 310
Helix 137	AP2	R	175	186	Right-handed alpha
Helix 138	AP3	R	212	235	Right-handed alpha
Helix 139	AP4	R	250	286	Right-handed alpha
Helix 140	AP5	R	287	321	Right-handed alpha
Helix 141	AP6	R	334	342	Right-handed alpha
Helix 142	AP7	R	342	367	Right-handed alpha
Helix 143	AP8	R	380	406	Right-handed alpha
Helix 144	AP9	R	406	463	Right-handed alpha
Helix 145	AQ1	S	60	81	Right-handed alpha
Helix 146	AQ2	S	82	91	Right-handed alpha
Helix 147	AQ3	S	103	162	Right-handed alpha
Helix 148	AQ4	S	171	174	Right-handed 310
Helix 149	AQ5	S	175	186	Right-handed alpha
Helix 150	AQ6	S	212	235	Right-handed alpha
Helix 151	AQ7	S	250	286	Right-handed alpha
Helix 152	AQ8	S	287	321	Right-handed alpha
Helix 153	AQ9	S	334	342	Right-handed alpha
Helix 154	AR1	S	342	367	Right-handed alpha
Helix 155	AR2	S	380	406	Right-handed alpha
Helix 156	AR3	S	406	463	Right-handed alpha
Helix 157	AR4	T	60	81	Right-handed alpha
Helix 158	AR5	T	82	91	Right-handed alpha
Helix 159	AR6	T	103	162	Right-handed alpha
Helix 160	AR7	T	171	174	Right-handed 310
Helix 161	AR8	T	175	186	Right-handed alpha
Helix 162	AR9	T	212	235	Right-handed alpha
Helix 163	AS1	T	250	286	Right-handed alpha
Helix 164	AS2	T	287	321	Right-handed alpha
Helix 165	AS3	T	334	342	Right-handed alpha
Helix 166	AS4	T	342	367	Right-handed alpha
Helix 167	AS5	T	380	406	Right-handed alpha
Helix 168	AS6	T	406	463	Right-handed alpha
Helix 169	AS7	U	60	81	Right-handed alpha
Helix 170	AS8	U	82	91	Right-handed alpha
Helix 171	AS9	U	103	162	Right-handed alpha
Helix 172	AT1	U	171	174	Right-handed 310
Helix 173	AT2	U	175	186	Right-handed alpha
Helix 174	AT3	U	212	235	Right-handed alpha
Helix 175	AT4	U	250	286	Right-handed alpha
Helix 176	AT5	U	287	321	Right-handed alpha
Helix 177	AT6	U	334	342	Right-handed alpha
Helix 178	AT7	U	342	367	Right-handed alpha
Helix 179	AT8	U	380	406	Right-handed alpha
Helix 180	AT9	U	406	463	Right-handed alpha
Helix 181	AU1	V	60	81	Right-handed alpha
Helix 182	AU2	V	82	91	Right-handed alpha
Helix 183	AU3	V	103	162	Right-handed alpha
Helix 184	AU4	V	171	174	Right-handed 310
Helix 185	AU5	V	175	186	Right-handed alpha
Helix 186	AU6	V	212	235	Right-handed alpha
Helix 187	AU7	V	250	286	Right-handed alpha
Helix 188	AU8	V	287	321	Right-handed alpha
Helix 189	AU9	V	334	342	Right-handed alpha
Helix 190	AV1	V	342	367	Right-handed alpha
Helix 191	AV2	V	380	406	Right-handed alpha
Helix 192	AV3	V	406	463	Right-handed alpha
Helix 193	AV4	W	60	81	Right-handed alpha
Helix 194	AV5	W	82	91	Right-handed alpha
Helix 195	AV6	W	103	162	Right-handed alpha
Helix 196	AV7	W	171	174	Right-handed 310
Helix 197	AV8	W	175	186	Right-handed alpha
Helix 198	AV9	W	212	235	Right-handed alpha
Helix 199	AW1	W	250	286	Right-handed alpha
Helix 200	AW2	W	287	321	Right-handed alpha
Helix 201	AW3	W	334	342	Right-handed alpha
Helix 202	AW4	W	342	367	Right-handed alpha
Helix 203	AW5	W	380	406	Right-handed alpha
Helix 204	AW6	W	406	463	Right-handed alpha
Helix 205	AW7	X	60	81	Right-handed alpha
Helix 206	AW8	X	82	91	Right-handed alpha
Helix 207	AW9	X	103	162	Right-handed alpha
Helix 208	AX1	X	171	174	Right-handed 310
Helix 209	AX2	X	175	186	Right-handed alpha
Helix 210	AX3	X	212	235	Right-handed alpha
Helix 211	AX4	X	250	286	Right-handed alpha
Helix 212	AX5	X	287	321	Right-handed alpha
Helix 213	AX6	X	334	342	Right-handed alpha
Helix 214	AX7	X	342	367	Right-handed alpha
Helix 215	AX8	X	380	406	Right-handed alpha
Helix 216	AX9	X	406	463	Right-handed alpha

There are no sheets in PDB entry 9GK2

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9GK2

Analysis of interatomic Contacts of Structural Units in PDB entry:
9GK2